Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3400 ATGGCCAACGACAAGAGCAAAGAGAATGAATATTTTTTAGATGCAAACGAAGATGAAAACGATATTGAAGCTGTCAACTATGATAGTGATAGTAGTAATAATGGTAATGATAATAATGATGATGACGATGATGATGATGATCGAAATGCTATACAACGACCTCAATCTTTCACTTCTCAACAATGGCCTCAAAGTTACAATGAGGCTATTGATCCTTTAACAATTGCGGCTGCACCAAATCTTGGATCAGTTCTGAGAGCACCAAGTGTTATTTACGCAAGCTCTGCAGCGGGTCGTTCTTCCAAGAGTTACTTGGAATTACAAGATACTTTTCTATCTGGTACTCAAATTCAAGAATCAACTTGGTGGGAGAAAGCTTCCATTCAAAAGCAAATTCCTGAGGAATTGCCACTTGGTTATGGATGTACCTTCACTCAAACTATTTTTAATGGGCTTAATGTGTTGGCTGGAGTTGGGCTTCTATCTGCACCTGATACTGTGAAGCAAGCTGGGTGGGCGAGTTTGGTGGTGATGGCTATTTTTGCAGTTGTATGTTTTTATACAGCAGAGCTTATGAGACATTGCTTTCAAAGCAGAGAAGGCATAACTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGCCGAGTTATTATATCATCATATTGTGTGGAATTTATCATCATGGAAGGTGATAACCTTTCTGGTCTGTTTCCTGGAACATCCTTGCATTGGGGAGGTTTAAATTTGGATGGCAAGCACTTATTTGCAATTTTGGCTGCACTTGTTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGTTTAGTCTCTTATGTCTCAGCTGGAGGGGTTATTGGGACAGCTTTGGTTGCTGTTTGTGTGTTTGTTGCTGGGACAAGTAAAGATGTTGGATTCCATCACACTGGTCCATTGGTGAATTGGAGTGGCGTTCCATTTGCTTTTGGTATCTATGGGTTTTGCTTTGCTGGACATTCAGTTTTTCCCAATATTTATCAGTCTATGGCTAACAAAAAAGATTTTACCAAGGCAATACTCATATGTTTTGTTTTGCCCATGTTTTTATATGGAAGCGTTGGAGCCGCGGGATTTCTTATGTTTGGTGAAGGGACCACGTCTCAGATAACATTGAATCTACCACGAGATGCATTTGCTTCCAAAGTCTCCTTGTGGACTATAGCAATTATCCCACTAACTAAATATCCTTTTCTGTAA 1239 0.3979 MANDKSKENEYFLDANEDENDIEAVNYDSDSSNNGNDNNDDDDDDDDRNAIQRPQSFTSQQWPQSYNEAIDPLTIAAAPNLGSVLRAPSVIYASSAAGRSSKSYLELQDTFLSGTQIQESTWWEKASIQKQIPEELPLGYGCTFTQTIFNGLNVLAGVGLLSAPDTVKQAGWASLVVMAIFAVVCFYTAELMRHCFQSREGITSYPDIGEAAFGKYGRVIISSYCVEFIIMEGDNLSGLFPGTSLHWGGLNLDGKHLFAILAALVILPTVWLKDLRLVSYVSAGGVIGTALVAVCVFVAGTSKDVGFHHTGPLVNWSGVPFAFGIYGFCFAGHSVFPNIYQSMANKKDFTKAILICFVLPMFLYGSVGAAGFLMFGEGTTSQITLNLPRDAFASKVSLWTIAIIPLTKYPFL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3400 412 MobiDBLite consensus disorder prediction 1 64 - -
Mal3g3400 412 PANTHER OS05G0424000 PROTEIN-RELATED 33 412 - -
Mal3g3400 412 Pfam Transmembrane amino acid transporter protein 143 405 IPR013057 -
Mal3g3400 412 PANTHER AMINO ACID TRANSPORTER AVT1A 33 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3400 Mal-Chr3 110768517 110771771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3400 31 412 Amino Acid or Auxin Permease AAAP Family AT2G41190 55.473 1.08e-149 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3400 K15015 - gmx:100790344 496.893