Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3395 ATGCATCCTTGGCTTGAAAGTTTAGTTAATGTATGCAGGAACAGGAAGAATAACAACTTTGCTGCATTCGACGATGACCCTCTCGCAAGATCGATTAATCTCCAAAGGCATTACTATGGAGAATTTTCCAGTGCTGCTGTTCAAGCCAATACATCTATGGAGGATCAAAGCCAAATTGAAGTTGCCTCTAAAAATGCACTCTTTCTTGGAATTTACGACGGCCATGGTGGCGTCGAAGCTTCCCATTTCATCTGTGATAAGCTCTTCAACAATCTACTGAGGCTTGCTAATGATAATGAGAATGATATAACTGAAGCTACCTTGAGGAATGCTGTTTCTGCTACTGAAGAGGGTTTTTTGGATTTTGTAAGAACGCATTATGATGTAGCGCCAAATCTTGGAATAGTTGGTTCATGCTGTCTTGCTGGAATTATATGGAAAGGGACGCTACATGTTGCGAATCTTGGAGATTCGCGCGCTGTAATTGGTACTATGGTTGATAATAAAATCCGTGCTGAGCAGTTGACAAGAGATCACAACTGTAATGATCAAGCTATTAGAGAAGAACTCAAGTCAATGCATCTTGATGATCCTACGATTGTGATGAAGGAGAACGGATCGTGGCGTGTTAAAGGCTTCATGATGGTTAGTAGAGCTATTGGTGATGCATATTTGAAAAGGCCTGAATTTACGCTATGCGAATCGTTTCCCAAATTTACAAAAGTTCCTGAACCTTTTACTAGAGGTGTGCTATCAGCAGAACCAGAGATGTGCACTAGAGTTTTAACAGATAGTGATAAGTTTCTGATATTTGCTTCTGATGGACTTTGGGAGTTACTGTCAAATGAACGAGCAGCTGAAATTGTTCAAAAGAATCCAAGATATGGAATTGCGAAAAGGCTTTTGAGTACTGCTTTAGTGGAAGCTGCTAAAAGAAGGAAGCTTACCTATAGGAACATTCAGGCCGCTGCTCCGGGACTCAGGAGGTCTTTACATGATGATATAAGTGTGATTGTTGTGTTCTTGGACAACACGTCGTTTCCAAGGAGCTGCGTACTTAATTTGTCCTACATATGCTCATCTGACACGCCTCTACAATCGGATTTTTCACGGTCTGGATTAACCGCTTCAAGGCTGAACATTGGTGTCATGAACCGGTTTAAGTCAGGTTCATCGCATGCATCTAGCTCTCATGCTCAGGGCCCTCAAAGTCCTCGGACTCCTCTGGCTCAGAACACTCAAACCCCTGAGGCCGAGGGTTCTTAG 1266 0.425 MHPWLESLVNVCRNRKNNNFAAFDDDPLARSINLQRHYYGEFSSAAVQANTSMEDQSQIEVASKNALFLGIYDGHGGVEASHFICDKLFNNLLRLANDNENDITEATLRNAVSATEEGFLDFVRTHYDVAPNLGIVGSCCLAGIIWKGTLHVANLGDSRAVIGTMVDNKIRAEQLTRDHNCNDQAIREELKSMHLDDPTIVMKENGSWRVKGFMMVSRAIGDAYLKRPEFTLCESFPKFTKVPEPFTRGVLSAEPEMCTRVLTDSDKFLIFASDGLWELLSNERAAEIVQKNPRYGIAKRLLSTALVEAAKRRKLTYRNIQAAAPGLRRSLHDDISVIVVFLDNTSFPRSCVLNLSYICSSDTPLQSDFSRSGLTASRLNIGVMNRFKSGSSHASSSHAQGPQSPRTPLAQNTQTPEAEGS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3395 421 CDD PP2Cc 39 342 IPR001932 -
Mal3g3395 421 Pfam Protein phosphatase 2C 61 314 IPR001932 -
Mal3g3395 421 ProSiteProfiles PPM-type phosphatase domain profile. 38 342 IPR001932 -
Mal3g3395 421 SMART PP2C_4 34 340 IPR001932 -
Mal3g3395 421 MobiDBLite consensus disorder prediction 388 421 - -
Mal3g3395 421 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Mal3g3395 421 PANTHER ALPHABET, ISOFORM E-RELATED 14 350 - -
Mal3g3395 421 SUPERFAMILY PP2C-like 41 344 IPR036457 -
Mal3g3395 421 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 14 350 - -
Mal3g3395 421 Gene3D - 23 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3395 Mal-Chr3 110734056 110735708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3395 28 370 PP2C-type Phosphatase Gene Family AT5G06750 52.286 1.11e-118 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3395 K01102 - csv:101222146 374.785