Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3394 ATGGGCAGTAGAAGTAGAATTGGTGAGGAGACTAACAAGGTTGTCAACGGGATGCCGAGCTACGCTCCTCCTTCTAATTCCATGGGCTTGGAAGGGACTAATATTCATCCTTCTCGAATTTCTGATTTTGGAGCCCTTGAACAATCTATCGGATTTCGCGTTGAGGATGCCATGAACCTTAGCAGAAATCCAGTTTTTAATCAAATGAAAGCAAATAGCCAAGCTTTAGGTGCTGATATTCAATTTGGTGCTTTAAGTAAGTCAATTGCAAACTCGGATATAAACCTCTCTGCTGCAATTGCTGGGTCTCAGACATTGCAATTACAAAAAGACGCACTGCCAAATTTGGCTTCAACATCTGGCGGCCATCGTGAGAATTGGGGAGAGTCCAACATGGCCGAGGGAAGCGCTGATACTTCAACAGATGATACAGAAGACAAAAATCAAATTCCTGAAAGGGGTGAATCCAGTGAAAGATCGAAAGATAAATCGGATCAAAAGACGTTAAGACGGCTAGCTCAAAATCGCGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGCTGAAATTGACCCAACTGGAGCAAGAATTACAGCGAGCACGCCAGCAGGGAATATTTATTTCAAGTACTGGAGAGCAGACCCATTCAATGAGTGGAAATGGTGCAATGGCATTTGATGCAGAATATGCGCGATGGTTAGAAGAGCATAATAGGCAAACCAATGAACTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAATTGCGTACCATTGTCGACAATTTCATGACTCAATTTGAAGATATCTACAGGCTAAAAGGTGTTGCAGCAAAAGCTGATGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGCTCATCCGAACTTCTTAAGCTATTGGTAAGTCATTTGGAGCCTTTGACTGAGCAACAATTGATGGGAATCTACAACTTGCAACAGTCATCTCAACAAGCTGAAGACGCTCTCTCCCAAGGAATGGATGCATTGCAGCAATCACTTTCTGAGACATTGGCTAATGGTTCACCTAACCCATCAGGTTCTTCTGGAAATGTGGCCAATTACATGGGACAAATGGCTATGGCCATGGGAAAGCTCGGTACTCTTGAGGGATTTCTTCGCCAGGCTGATAACCTGCGGCAGCAAACATTGCAACAGATGCTTCGGATATTAACAACCAGGCAATCAGCTCGAGCTCTTCTCGCAATAAGTGATTATTTCTCCCGGCTGCGAGCTCTGAGTTCTCTATGGCTTGCACGACCAAGGGAATAA 1359 0.443 MGSRSRIGEETNKVVNGMPSYAPPSNSMGLEGTNIHPSRISDFGALEQSIGFRVEDAMNLSRNPVFNQMKANSQALGADIQFGALSKSIANSDINLSAAIAGSQTLQLQKDALPNLASTSGGHRENWGESNMAEGSADTSTDDTEDKNQIPERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3394 452 CDD bZIP_HBP1b-like 167 219 - -
Mal3g3394 452 PANTHER TRANSCRIPTION FACTOR TGA9 54 452 - -
Mal3g3394 452 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 54 452 - -
Mal3g3394 452 SMART brlzneu 163 226 IPR004827 GO:0003700|GO:0006355
Mal3g3394 452 MobiDBLite consensus disorder prediction 116 169 - -
Mal3g3394 452 Coils Coil 186 213 - -
Mal3g3394 452 MobiDBLite consensus disorder prediction 140 169 - -
Mal3g3394 452 Pfam Seed dormancy control 250 325 IPR025422 GO:0006351|GO:0043565
Mal3g3394 452 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 209 IPR004827 GO:0003700|GO:0006355
Mal3g3394 452 MobiDBLite consensus disorder prediction 116 138 - -
Mal3g3394 452 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
Mal3g3394 452 Pfam Basic region leucine zipper 163 209 IPR004827 GO:0003700|GO:0006355
Mal3g3394 452 MobiDBLite consensus disorder prediction 1 21 - -
Mal3g3394 452 ProSiteProfiles DOG1 domain profile. 232 449 IPR025422 GO:0006351|GO:0043565
Mal3g3394 452 Gene3D - 166 218 - -
Mal3g3394 452 SUPERFAMILY Leucine zipper domain 167 210 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3394 Mal-Chr3 110704997 110709140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3394 132 452 bZIP Transcription Factor Family AT3G12250 73.716 2.74e-169 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal3g3394 DOG1 2.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3394 K14431 - gmx:778136 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3394 3 110704997 110709140 Mal3g3394 3 110704997 110709140 ECH