Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3382 ATGCCTTACCTCATCCGCGAAAATCTCTTCATCAGCAACATCTCCGACGCCGCCGATATTCTCCAAATCACCACCAACCACCCTCACAACATCACCCACATCCTCTCCGTTCTCAGCTCCGCTTCCATCTCCTTCTTCTCCGAATGGCGTTCTTCCTTCTCTGTCCCTGTCAAGGAGATCTCCAAACTCCACGTCTCCGACCTCCCTACCGCCGCCAAGTCCGCTCTCTCACCGGATAAGCTTCTCTACTCGCTTGAATACGCCGGTGAAGGTTTCAAGCTCGTAAGAATGGCTGTTCCCCTGAGAGATACTGAGAGTGAGAATTTGTTGGATTATCTTGAAGTTTGTGTTGATTTTATTGAGAGGAGTAGGAAAGAAGGTGGTTCTGTTTTGGTTCATTGTTTTGCTGGTGTTTCTAGAAGTGCGGCGGTTATTACGGCTTATTTGATGAAAAGCGAAAATTTGTCACTAGAAGATGCCCTTGAATCGTTAAAGCAGAGCTGTGAATTTGTTTGCCCCAATGATGGTTTTCTAGAGCAGTTGAAAATGTTTGAGGAAATGGGTTTCAAGGTTGATCATTCTAGCCCAGTGTACAAGCGCTTTCGTCTGAAAATACTAGGTGAGAATCATTTCTCAGGGTCGAGGATAGACAGTTCTAAACTCGGTGCAGATCCTGGCATGCCTGTTGAAACCTCTTCAGAGGTGGGAGGAGCTACTAAGGTGGAAAATAATCGTAGCCCTACATATCGCTGTAAGAAGTGTCGTCGGATTGTTGCACTGCAAGAACATGTTGTAGATCATATTCCTGGTGAGGGTGAGACATCCTTTGGTTGGCACAAGCGGAGAAGTGGCAATCCTTTTAACAAGTCTGATGAATCTGAGTGTTCGTCCATATTTATTGAGCCTCTTCGATGGATGAAAGATGTTGAGGAAGGCGCGTTGGAGGGAAAGCTGTCCTGTGCTCATTGTGATGCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGTGGAAGCTGGATAACCCCAGCTTTTCAACTCCACAAAAGTCGGGTAGATATAAGCCTCATATAA 1080 0.463 MPYLIRENLFISNISDAADILQITTNHPHNITHILSVLSSASISFFSEWRSSFSVPVKEISKLHVSDLPTAAKSALSPDKLLYSLEYAGEGFKLVRMAVPLRDTESENLLDYLEVCVDFIERSRKEGGSVLVHCFAGVSRSAAVITAYLMKSENLSLEDALESLKQSCEFVCPNDGFLEQLKMFEEMGFKVDHSSPVYKRFRLKILGENHFSGSRIDSSKLGADPGMPVETSSEVGGATKVENNRSPTYRCKKCRRIVALQEHVVDHIPGEGETSFGWHKRRSGNPFNKSDESECSSIFIEPLRWMKDVEEGALEGKLSCAHCDARLGYFNWAGIQCSCGSWITPAFQLHKSRVDISLI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3382 359 ProSitePatterns Tyrosine specific protein phosphatases active site. 132 142 IPR016130 GO:0016311|GO:0016791
Mal3g3382 359 CDD DSP_DUSP12 4 192 - -
Mal3g3382 359 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 190 IPR029021 -
Mal3g3382 359 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 110 166 IPR000387 GO:0016311|GO:0016791
Mal3g3382 359 Pfam Dual specificity phosphatase, catalytic domain 96 186 IPR000340 GO:0008138|GO:0016311
Mal3g3382 359 Gene3D Protein tyrosine phosphatase superfamily 4 207 IPR029021 -
Mal3g3382 359 PIRSF DUSP12 83 359 IPR016278 GO:0006470|GO:0008138
Mal3g3382 359 PIRSF DUSP12 3 55 IPR016278 GO:0006470|GO:0008138
Mal3g3382 359 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 190 IPR020422 GO:0006470|GO:0008138
Mal3g3382 359 SMART dsp_5 1 187 IPR020422 GO:0006470|GO:0008138
Mal3g3382 359 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3382 Mal-Chr3 110457572 110461460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3382 5 186 Protein tyrosine phosphatase (PTP) family AT3G06110 27.174 5.59e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3382 K14819 - gmx:100776877 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3382 3 110457572 110461460 Mal3g3382 3 110457572 110461460 ECH