Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal3g3381 | ATGAAGGATTATGGCTATGCTCATCAGAATCTACAAAGCATGAAGGGTGCATTAGCATTTGTAAAGAATGTGGAAGTTGAGTTTGAAGATAAGAGGGAAAAATATGATGAGTTTTTAAATGTGATGAACGATTTCAAGGCTCTAAGAATTGATGCAGGAGGTGCCAAAGCAAGACTAGAGGAGCTGTTTAAAGAGCATAGACATTTAATTATGAGATTCAACTGCTTTATGCTAATGGGTTATCAAATCACTAATCATGATTATGAGACTGAAGATGAAGAAGACATGGAAGTACTTGACAAACTTGAGAAACTAGAGTCAGCTCTTCAACTTATTTTAGAAATTTTAGTGATCAAGAAGAAGCAAGCATAG | 372 | 0.3495 | MKDYGYAHQNLQSMKGALAFVKNVEVEFEDKREKYDEFLNVMNDFKALRIDAGGAKARLEELFKEHRHLIMRFNCFMLMGYQITNHDYETEDEEDMEVLDKLEKLESALQLILEILVIKKKQA* | 124 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal3g3381 | 123 | Gene3D | Paired amphipathic helix | 16 | 77 | IPR036600 | GO:0006355 | |
Mal3g3381 | 123 | PANTHER | SIN3B-RELATED | 9 | 95 | IPR039774 | GO:0003714 | |
Mal3g3381 | 123 | Pfam | Paired amphipathic helix repeat | 33 | 76 | IPR003822 | GO:0006355 | |
Mal3g3381 | 123 | ProSiteProfiles | PAH domain profile. | 7 | 80 | IPR003822 | GO:0006355 | |
Mal3g3381 | 123 | SUPERFAMILY | PAH2 domain | 13 | 79 | IPR036600 | GO:0006355 | |
Mal3g3381 | 123 | PANTHER | PROTEIN, PUTATIVE-RELATED | 9 | 95 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal3g3381 | Mal-Chr3 | 110418154 | 110418525 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal3g3381 | 17 | 103 | WRKY Transcription Factor Family | AT4G12020 | 44.828 | 2.35e-15 | 69.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mal3g3381 | PAH | 4e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal3g3381 | K11644 | - | mtr:MTR_7g089490 | 202.986 |