Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3381 ATGAAGGATTATGGCTATGCTCATCAGAATCTACAAAGCATGAAGGGTGCATTAGCATTTGTAAAGAATGTGGAAGTTGAGTTTGAAGATAAGAGGGAAAAATATGATGAGTTTTTAAATGTGATGAACGATTTCAAGGCTCTAAGAATTGATGCAGGAGGTGCCAAAGCAAGACTAGAGGAGCTGTTTAAAGAGCATAGACATTTAATTATGAGATTCAACTGCTTTATGCTAATGGGTTATCAAATCACTAATCATGATTATGAGACTGAAGATGAAGAAGACATGGAAGTACTTGACAAACTTGAGAAACTAGAGTCAGCTCTTCAACTTATTTTAGAAATTTTAGTGATCAAGAAGAAGCAAGCATAG 372 0.3495 MKDYGYAHQNLQSMKGALAFVKNVEVEFEDKREKYDEFLNVMNDFKALRIDAGGAKARLEELFKEHRHLIMRFNCFMLMGYQITNHDYETEDEEDMEVLDKLEKLESALQLILEILVIKKKQA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3381 123 Gene3D Paired amphipathic helix 16 77 IPR036600 GO:0006355
Mal3g3381 123 PANTHER SIN3B-RELATED 9 95 IPR039774 GO:0003714
Mal3g3381 123 Pfam Paired amphipathic helix repeat 33 76 IPR003822 GO:0006355
Mal3g3381 123 ProSiteProfiles PAH domain profile. 7 80 IPR003822 GO:0006355
Mal3g3381 123 SUPERFAMILY PAH2 domain 13 79 IPR036600 GO:0006355
Mal3g3381 123 PANTHER PROTEIN, PUTATIVE-RELATED 9 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3381 Mal-Chr3 110418154 110418525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3381 17 103 WRKY Transcription Factor Family AT4G12020 44.828 2.35e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g3381 PAH 4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3381 K11644 - mtr:MTR_7g089490 202.986