Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3380 ATGGGACTCTGTCATGGAAAACCCATTGAAACTTCACAAAGAGAAAGAGAAAGAGAAAATTCAACTTTCCCAAGTGATGAGATTTTGCCACTACCACCACCATCAAGCTCTCATCATCATGCAGCAAAAAAATCATCATCAAAGTTTCCATTTTTCAGTCCAAGTCCATTACCAAGTTTCTTCAAAAACTCACCAGCAAATTCAAGTGTGAGGACTAATTCAACACCTCTCCGGATCTTCAAACGACCCTTTCCTCCTCCGTCGCCGGCGAAGCACATTCGGGCACTTCTAGCTAGGAGACATGGCTCTGTGAAGCCTAATGAGGCTACTATACCTGAAGGGAGTGAGTGTGAAGTTGGGTTGGATAAGAGTTTTGGATTTTCTAAGCATTTTGTGACGAATTTTGAGATTGAACATGAAGTTGGGCGTGGCCATTTTGGTTATACTTGCTCTGCTAAGGGTAAAAAAGGAAGCTTTAAGGGTCTTGATGTTGCTGTTAAAGTCATTCCTAAATCTAAGATGACAACAGCAATTGCTATAGAGGATGTAAGAAGAGAAGTGAAAATATTGCGAGCTCTAACCGGGCATAAGAATTTGGTACAATTCTACGAAGCCTACGAAGACGAAGAAAATGTTTATGTAGTTATGGAATTATGCAAAGGAGGCGAATTGCTAGATAAGATTCTTTCCAGGGGTGGAAAGTACCCGGAAGAGGATGCCAGAGTTGTTATGATTCAGATATTAAGTGTGGTAGCTTACTGTCATCTACAGGGTGTTGTACACCGCGATCTCAAGCCAGAGAATTTTCTTTTTATTTCTGAGGATGAAAATTCTACACTGAAGGCCATTGACTTTGGACTCTCTGACTATGTAAAGCCAGATGAGAGATTGAATGACATAGTTGGAAGTGCTTATTACGTTGCACCAGAAGTCTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATCGGTGTAATTGCTTATATTCTGTTGTGCGGAAGCCGTCCCTTTTGGGCCAGGACAGAATCTGGCATATTTCGGGCTGTCCTTAAGGCAGATCCAAGTTTCGATGAAGCTCCTTGGCCTTCTTTATCGGCTGATGCAAAAGATTTTGTAAAAAGACTGTTGAATAAAGATTACCGTAAAAGACTAACTGCAGCTCAGGCTCTCAGTCATCCGTGGCTGGTGAATCACTTAGAGGATGTAAAGATACCATTTGATATGATAATCCACAAGCTCATCAAAACTTACATATGCTCGTCTTCTTTACGCAAATCAGCATTAGGGGCTCTTGCAAAGACATTGACATTAGTGCAGCTAGCATATCTCAAAGAACAATTTACTCTATTAGGGCCAAACAAAAGTGGGCTAATCTCTATGCAGAACTTCAAGACGGCTGTTTTAAGGAGCGCCACTGATGCCTCAAAGGATTCAAGGGTCTTAGATTATGCAAACATGGTTAGCTCAATCCAGTATCGAAAATTAGATTTTGAGGAATTTTGCGCTGCTGCTATAAGTGTCCATCAACTGGAGGGAATGGACACTTGGGAGCAACATGCAAGGCGTGCCTATGAGCTGTTTGAAAAGGATGGAAATAGACCAATTATGATCGAAGAGCTTGCCTCGGAACTTGGGCTTAGCCCCTCAGTACCTATTCACGTGGTACTCCAAGATTGGATAAGACACTCAGATGGAAAGCTTAGTTTCTTAGGGTTTGTCAGACTCCTGCATGGAGTTTCGTCTCGCACATTTCACAAGGCTTGA 1770 0.4209 MGLCHGKPIETSQRERERENSTFPSDEILPLPPPSSSHHHAAKKSSSKFPFFSPSPLPSFFKNSPANSSVRTNSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEATIPEGSECEVGLDKSFGFSKHFVTNFEIEHEVGRGHFGYTCSAKGKKGSFKGLDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDEENVYVVMELCKGGELLDKILSRGGKYPEEDARVVMIQILSVVAYCHLQGVVHRDLKPENFLFISEDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHLEDVKIPFDMIIHKLIKTYICSSSLRKSALGALAKTLTLVQLAYLKEQFTLLGPNKSGLISMQNFKTAVLRSATDASKDSRVLDYANMVSSIQYRKLDFEEFCAAAISVHQLEGMDTWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFHKA* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3380 589 Pfam Protein kinase domain 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3380 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Mal3g3380 589 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Mal3g3380 589 SMART serkin_6 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3380 589 PANTHER CDPK-RELATED KINASE 1 37 584 - -
Mal3g3380 589 MobiDBLite consensus disorder prediction 62 76 - -
Mal3g3380 589 SUPERFAMILY Protein kinase-like (PK-like) 124 425 IPR011009 -
Mal3g3380 589 MobiDBLite consensus disorder prediction 62 84 - -
Mal3g3380 589 MobiDBLite consensus disorder prediction 1 48 - -
Mal3g3380 589 SUPERFAMILY EF-hand 427 580 IPR011992 -
Mal3g3380 589 ProSiteProfiles Protein kinase domain profile. 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3380 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 584 - -
Mal3g3380 589 CDD STKc_CAMK 134 396 - -
Mal3g3380 589 MobiDBLite consensus disorder prediction 9 23 - -
Mal3g3380 589 Gene3D - 419 580 - -
Mal3g3380 589 Gene3D Phosphorylase Kinase; domain 1 128 224 - -
Mal3g3380 589 Gene3D Transferase(Phosphotransferase) domain 1 225 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3380 Mal-Chr3 110411618 110417455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3380 1 585 EF-hand Containing Proteins AT3G50530 66.667 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal3g3380 Pkinase 4.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3380 - - gmx:100803625 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3380 3 110411618 110417455 Mal3g3380 3 110411618 110417455 ECH