Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3376 ATGCTTCAACAACAGATTCAGAATATTGGAATGGAAAATAACTCAGAACTCTTTCAATTCCTTGTTGCTAATAACCCTTCATTCTTTGACTACTCAAGTACTCCTAGCTCCATGATGCAACAAAGTTTTTGCAGTTCCTCAGATAATAACAACAACTATTACCACCCCTATGATGTTTCTGAAATTACTGATACACCCTCCCAGCAAGATAGAGCTCTAGCTGCTTTGAAGAATCACAAGGAAGCTGAGAAGAGAAGGAGGGAGAGAATCAATTCTCATCTTGATCACCTTCGTACCCTTCTCCCTTGCAACTCCAAGACTGACAAAGCTTCACTTCTAGCAAAAGTAGTGGAACGTGTGAAAGAATTAAAGCAACAAACATCTCAAATCACACAACTCGAAACAGTTCCATCGGAAACCGACGAAATAACCGTCATATCCGCGGGCAGCGACATCACCGGCGAAGGCAGACTGATATTCAAAGCCTCATTATGCTGCGAGGATCGGTCCGACCTAATTCCCGACCTAATCGAAATCCTCAAGTCTCTTCACCTGAAAACTCTGAAAGCTGAAATGGCTACACTTGGTGGAAGAACACGTAACGTTCTTGTTGTTGCTGCTGAGAAAGAACATAGTGTTGAATCGATTCATTTTCTTCAGAATTCGCTTAGGTCTTTGTTGGATAGGTCTAGTGGTTGTAATGATAGGTCGAAACGACGTCGTGGATTGGATCGAAGAATGATGCCTTAA 750 0.4213 MLQQQIQNIGMENNSELFQFLVANNPSFFDYSSTPSSMMQQSFCSSSDNNNNYYHPYDVSEITDTPSQQDRALAALKNHKEAEKRRRERINSHLDHLRTLLPCNSKTDKASLLAKVVERVKELKQQTSQITQLETVPSETDEITVISAGSDITGEGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLVVAAEKEHSVESIHFLQNSLRSLLDRSSGCNDRSKRRRGLDRRMMP* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3376 249 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 13 248 - -
Mal3g3376 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 133 IPR036638 GO:0046983
Mal3g3376 249 CDD ACT_UUR-ACR-like 163 227 - -
Mal3g3376 249 MobiDBLite consensus disorder prediction 230 249 - -
Mal3g3376 249 Gene3D - 69 135 IPR036638 GO:0046983
Mal3g3376 249 MobiDBLite consensus disorder prediction 231 249 - -
Mal3g3376 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Mal3g3376 249 PANTHER TRANSCRIPTION FACTOR BHLH30 13 248 IPR045847 GO:0003700|GO:0006355
Mal3g3376 249 Pfam Helix-loop-helix DNA-binding domain 78 123 IPR011598 GO:0046983
Mal3g3376 249 SMART finulus 80 129 IPR011598 GO:0046983
Mal3g3376 249 CDD bHLH_AtAIG1_like 69 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3376 Mal-Chr3 110362675 110364039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3376 17 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 62.100 2.11e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g3376 HLH 6.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3376 - K22484 pvu:PHAVU_001G121200g 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3376 3 110362675 110364039 Mal3g3376 3 110362675 110364039 ECH