Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3361 ATGGCATCTAGCTCAATGTCAGCTTCTGGCTCATGGAGTGTTAAGGAGAATAAAGCCTTTGAAAGAGCACTAGCTGTTTATGACAAAGACACACCAGATCGTTGGTACAATGTAGCTCATGCTGTTGGTGGCAAAACTCCTGAGGAAGTTAAGAAACACTATGAACTTCTTGTTGAGGATATTAAGCATATTGAGTCTGGGAAAGTTCCATTTCCAAATTACAAGAAAATTTCAGTGTCTCATGAGGAGAAAAGGATGAGGAACCTGAACCTTCATTGA 279 0.4014 MASSSMSASGSWSVKENKAFERALAVYDKDTPDRWYNVAHAVGGKTPEEVKKHYELLVEDIKHIESGKVPFPNYKKISVSHEEKRMRNLNLH* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3361 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Mal3g3361 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 91 IPR044636 GO:0003700
Mal3g3361 92 Gene3D - 2 71 - -
Mal3g3361 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Mal3g3361 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Mal3g3361 92 SUPERFAMILY Homeodomain-like 5 62 IPR009057 -
Mal3g3361 92 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 91 - -
Mal3g3361 92 CDD SANT 16 58 IPR001005 -
Mal3g3361 92 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3361 Mal-Chr3 110128640 110129047 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g3361 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3361 - - gmx:100818368 163.31