Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3353 ATGGCTTCAAGACCCATTGTTCCTCAACAACAACAACAACCCAGAGGTGATGCTGCCTTGGGAGGAGGGAAACAGCAGAAGAAGAACGGTGCAGCAGGCGAAGGAAGGAACCGTAGAGCACTTCTTGATATTGGAAATGTTGTCACACTAAAAGGTGTTGAAGTTAAGCCTAATCGCCCTGTTACAAGGAGTTTTTGTGCTCAATTACTTGCCAATGCTCAAGCAGCAGCTGTTGCTGAAAACAATAAGAAACAAGCTTGTGTAAATCTGGCACCTGGACCTGTTCCGCCTGTTGTTGCTGATGGAGTTGCAGCAGTGGCTAGAAGAGTGGTAGTGGCCCCTAAACCTGTTCAGAAGAAAGTCACTGCAAAACCAAAGCCTGTGGAAGTAGTTGAAATAAGTTCTGAAGAAAAGGAGAATGAAGAGAAATCTGTGCACAAGAAAAAGGAAGCAGATGTTAATTCCAAGAAGAAACCATCACGCACTCTTACTTCTGTCCTCACTGCTAGAAGCAAGGCTGCATGTGGTTTGACAAACAAACCAAAGGAGATTGTTGACATTGATGCTAGTGATGTTAACAATGAGTTAGCTGCTGTTGAATATCTTGAAGACATATACAAGTTCTATAAGATTGTTGAGAATGAAAGCCGTCCACATGATTACATGGACTCACAACCTGAGATAAATGAGAGGATGAGAGCAATACTCATTGATTGGCTAGTAGATGTTCATGCAAAATTTGAACTTTCACCTGAAGCCCTTTACCTCACAATCAACATAGTTGATAGGTTCTTAGCTGTTAACCTTGTGTCAAGGAGAGAACTTCAATTGGTTGGAATCAGTGCCATGCTGATGGCATCAAAGTATGAAGAAATCTGGCCACCTGAGGTTAATGACTTTGTGTGCCTATCAGATAGAGCATACAATCATGAACAAATACTCATCATGGAGAAAACCATCCTAAGGAAGCTTGAATGGACTTTGACTGTGCCTACACCTTTTGTGTTCCTGGTTCGATTCATCAAGGCTGCATCGGTATCTATGGTTCCTTCGGATCAAGGAGCTTTTGAAATGATGGCTCATTTTCTCTCTGAGTTGGGAATGATGCATTATGCTACATTAAGGTACTGTCCATCAATGCTTGCTGCCTCAGCAGTTTATGCAGCAAGGAGCACATTGAGCAAGAGTCCTGCTTGGAATGAGACACTCAAGATGCATACCGGTTACTCCGAAGAACAGTTGATGGATTGTGCTAGGTTGTTGGTGAGTTTTCACTCTGGTGCTGTGAATGGAAAGCTGAAGGTTGTGTATAAGAAGTACTCCGATCCTCAGAAAGGTGCTGTTGCCGCGCTTCCACCGGCAAAGAATCTTCTGCCACCTGCTGCTGTAGGTTCTTTCTAG 1401 0.434 MASRPIVPQQQQQPRGDAALGGGKQQKKNGAAGEGRNRRALLDIGNVVTLKGVEVKPNRPVTRSFCAQLLANAQAAAVAENNKKQACVNLAPGPVPPVVADGVAAVARRVVVAPKPVQKKVTAKPKPVEVVEISSEEKENEEKSVHKKKEADVNSKKKPSRTLTSVLTARSKAACGLTNKPKEIVDIDASDVNNELAAVEYLEDIYKFYKIVENESRPHDYMDSQPEINERMRAILIDWLVDVHAKFELSPEALYLTINIVDRFLAVNLVSRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYNHEQILIMEKTILRKLEWTLTVPTPFVFLVRFIKAASVSMVPSDQGAFEMMAHFLSELGMMHYATLRYCPSMLAASAVYAARSTLSKSPAWNETLKMHTGYSEEQLMDCARLLVSFHSGAVNGKLKVVYKKYSDPQKGAVAALPPAKNLLPPAAVGSF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3353 466 SUPERFAMILY Cyclin-like 193 328 IPR036915 -
Mal3g3353 466 MobiDBLite consensus disorder prediction 133 157 - -
Mal3g3353 466 MobiDBLite consensus disorder prediction 1 37 - -
Mal3g3353 466 MobiDBLite consensus disorder prediction 133 162 - -
Mal3g3353 466 Pfam Cyclin, C-terminal domain 331 453 IPR004367 -
Mal3g3353 466 MobiDBLite consensus disorder prediction 1 16 - -
Mal3g3353 466 ProSitePatterns Cyclins signature. 233 264 IPR006671 -
Mal3g3353 466 Gene3D - 204 450 - -
Mal3g3353 466 CDD CYCLIN 232 321 IPR013763 -
Mal3g3353 466 PANTHER CYCLINS 25 460 IPR039361 -
Mal3g3353 466 SUPERFAMILY Cyclin-like 332 456 IPR036915 -
Mal3g3353 466 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 25 460 - -
Mal3g3353 466 CDD CYCLIN 329 422 IPR013763 -
Mal3g3353 466 PIRSF Cyclin_A_B_D_E 1 464 IPR039361 -
Mal3g3353 466 Gene3D - 218 329 - -
Mal3g3353 466 SMART cyclin_7 335 423 IPR013763 -
Mal3g3353 466 SMART cyclin_7 238 322 IPR013763 -
Mal3g3353 466 Pfam Cyclin, N-terminal domain 204 328 IPR006671 -
Mal3g3353 466 SMART Cyclin_C_2 331 454 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3353 Mal-Chr3 109977523 109979589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3353 1 458 Core Cell Cycle Gene Families AT4G37490 52.119 1.01e-139 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3353 K21777 - mtr:MTR_7g089080 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3353 3 109977523 109979589 Mal3g3353 3 109977523 109979589 ECH