Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3352 ATGCCTTCTTCAAATTCAAATTCAAATTCAAATTCAAATTCAAATTCAAAGCATAGCAGTAGCAGCAGCAGTAAGAAGCAATCAAAATCAAAATCAAGGTTACAATCGTCAATTCCCGATGCCGCCTCCACTCCACCCCGCACCACCACCACCATCCAACTCGACTCTCTCCTACAACAAGCTTCTCGAATCTTTCCTTCCTTCATTTCACATTCTGCTTTCATCGCCGAAATCATTGACATCGAATCCACCGATTCTCTTTCCAAAGCCGCTAAAATTTGGCTTTCTGAGTCTTCTATGGTTGCTTCTTCTCTTGCTCCCGGTTCACTTGTCTCTGTTTCTGTTCCTTCTTCAAGTAAAGGGATTGCGCAATCACATAATTTTCCTCTCACGTCATTGACTAATGAATGTGTCAAATCCTATGGATTGGAAACTTCTAACACATTGGATGATGATGCTGCAGGAAATTACTTTGCTATTGCAACGGTTTTTCCTTCTAAGAAGGTATTGAAGAATGGAGTACGCCTGTCTTCAAATCTTTCCTTTGCCATGGGATGTCCTACTTTAGGCACATGTGTGTTTGTTCACCCAGTACAGAAACAATCATCGGTATATAATTGCAAAGAATTATATCTTCAGCTGGCTCCTTGTAAGAGTGGACCACCATTAAAAGTTAATAATTTCCCCTCATTGGACTTGTCTAAGTCAATATCTCGTGCCCAATCTGAGAATGGCATTGTTGTATCTCCTAAAACGCCTTCTTATGGATCAAAGTTTTCTAATGACAGTGTGTATTCTTCCCCTGTATATGAAGATTCAGCATCAAGTGCAACCAATTATAATGAGCAATTGGTGACTTCATTTGATATTAGCAAGGCATTAGGAAATGAAAGTTCCAAAAAATTACTAGAAACATGTGCAACTGCATTATTATACTCTCGTTGTCTATTGCTAGGGAATCTTGTCACAGTCCCAATGTTGTCTGAGTTTTTCATTTTCCAAGTGACGGGCATTAAAAAGGTGCCAGCTACCATACCTGACTATGCTCCATTAAATGGGAGTAGCAATTTAAATCTTGAGGATTCTGATATGGTAGAGAATGTGAATCTGGCTTTCACCGTCAATTGGGAAACAAAAGTATTTTTATCTTTGCCATCTAATGCAGCATTTGAAGAGTCAATTCAAAGAGACTTTTCGTGTCTGAAATTTGATAATATTTCCAAACTAGGTGGTCTATCTAAAGAAGAAATGCTTTTGAAGGGCATAATTTCTTTTTCATTGAACGATATTTTATCAAGATTTGGTCAGCAGAATACCAGAGGAGTCCTTCTTCATGGTCCACCTGGTACGGGAAAAACTTCCTTGGTTCAATTATGCGCTCATAATGCTGGGGTCAATTTTTTCTCAATAAATGGACCTGAAATTGTTACCCAATATTATGGGGAAAGTGAAAAGGCATTGCATGAAGTTTTTGATTCAGCCATTCAAGCTACACCTGCCGTGATATTTATTGATAAAATAGATGCAATTGCCCCTCCAAGGAAAGATGGGGGTGAAGAGCTATCTAAAAGATTGGTTGTAACCCTATTGAGTCTGATGGACGGAATTAGAAGAAATGAAGGGTTAGTTGTGATTGCTGCTACTAATAGGCTTGACCATATTGATCCAGCTCTCAGACGACCTGGAAGATTTGACAAGGAAATTGAAATTGGTGTGCCATCACAAGCGCAACGGGGAGATATTTTGCGCGCTATTCTCTGTGAAATTGATCACTCTCTTTCTGAGACACAAATTGAAGAGCTTGCCTCAATAACTCATGGATTTGTAGGTGCTGATTTAGTTGGCCTTCGCGATTGGGCAGCTTTTATTTGTCTACGGCGTTATGCTGAACATAAACTTAAGAAGACTTGCAATGCTAGTTCTGATGACATAACAGAGCAACCTGCCCCGTTGAATAGTGCAACAAACTCGAGAGACCATTCAGATGAGACGCCTGATCCTGGTGAAGAAGAGCATATTTTGAAAGTGACTTTTGAGGATTTTCATAAGGCAAGGCCTGAAATAAGACCTAGTGCCATGAGAGAGGTGACTCTCGAGGTTCCTAAGGTTAATTGGGAAGATATTGGCGGCCAGAAGGAGGTAAAAAATCAATTGTTGGAAGCAGTAGTGTGGCCCCAAAAGCACCGTGATGCATTCACCCGTATTGGGACGGATCCTCCAACGGCTGTATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGATTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGCGAATCTGAGAAGGCTGTAAGATCATTGTTTGATAAAGCAAGGGCCAATGCCCCAGCAATTATATTTTTCGATGAAATAGACAGTCTTGCTGTAACTCGTGGGAAAGATGGTGATGGTGTTTCAGTGTCCGATAGGGTCATGGCTCAACTTCTTGTTCAATTGGATGGTGTGCTTAAGAGAGTTGATGTTGTTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGACCCTGCTCTTTTAAGACAAGGACGCTTTGACCGTCTGCTATATGTTGGGCCTCCAAATGAGATGGACAGAGAAGAGATATTTAGCATTCATTTGCGCAAAACTCCATATGATTCTGATGTTAGCATAAAAGAACTGGCTCAACTGACAGATGGCTATACTGGGGCTGATATAGCACTTATATGTCGACAAGCAGCTCTTGCAGCATTGAAGGAAAGCTTTGATGCTTCCGTTGTAACAATGAAGCACTTTAAGATGGCAATCGATCAGGTTCAGCCCTCAGAATTTCAGTCATACGAAAAGCTGTCCGCAAAATTTCAAAGGGCCGTGTTCTCTGATGCGATATAA 2919 0.4108 MPSSNSNSNSNSNSNSKHSSSSSSKKQSKSKSRLQSSIPDAASTPPRTTTTIQLDSLLQQASRIFPSFISHSAFIAEIIDIESTDSLSKAAKIWLSESSMVASSLAPGSLVSVSVPSSSKGIAQSHNFPLTSLTNECVKSYGLETSNTLDDDAAGNYFAIATVFPSKKVLKNGVRLSSNLSFAMGCPTLGTCVFVHPVQKQSSVYNCKELYLQLAPCKSGPPLKVNNFPSLDLSKSISRAQSENGIVVSPKTPSYGSKFSNDSVYSSPVYEDSASSATNYNEQLVTSFDISKALGNESSKKLLETCATALLYSRCLLLGNLVTVPMLSEFFIFQVTGIKKVPATIPDYAPLNGSSNLNLEDSDMVENVNLAFTVNWETKVFLSLPSNAAFEESIQRDFSCLKFDNISKLGGLSKEEMLLKGIISFSLNDILSRFGQQNTRGVLLHGPPGTGKTSLVQLCAHNAGVNFFSINGPEIVTQYYGESEKALHEVFDSAIQATPAVIFIDKIDAIAPPRKDGGEELSKRLVVTLLSLMDGIRRNEGLVVIAATNRLDHIDPALRRPGRFDKEIEIGVPSQAQRGDILRAILCEIDHSLSETQIEELASITHGFVGADLVGLRDWAAFICLRRYAEHKLKKTCNASSDDITEQPAPLNSATNSRDHSDETPDPGEEEHILKVTFEDFHKARPEIRPSAMREVTLEVPKVNWEDIGGQKEVKNQLLEAVVWPQKHRDAFTRIGTDPPTAVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFDKARANAPAIIFFDEIDSLAVTRGKDGDGVSVSDRVMAQLLVQLDGVLKRVDVVVIAATNRPDKIDPALLRQGRFDRLLYVGPPNEMDREEIFSIHLRKTPYDSDVSIKELAQLTDGYTGADIALICRQAALAALKESFDASVVTMKHFKMAIDQVQPSEFQSYEKLSAKFQRAVFSDAI* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3352 972 MobiDBLite consensus disorder prediction 636 670 - -
Mal3g3352 972 Gene3D - 876 946 - -
Mal3g3352 972 CDD AAA 709 875 - -
Mal3g3352 972 ProSitePatterns AAA-protein family signature. 542 560 IPR003960 GO:0005524|GO:0016887
Mal3g3352 972 Gene3D - 700 951 IPR027417 -
Mal3g3352 972 SMART AAA_5 438 574 IPR003593 -
Mal3g3352 972 SMART AAA_5 739 877 IPR003593 -
Mal3g3352 972 CDD AAA 440 571 - -
Mal3g3352 972 PANTHER - 666 968 - -
Mal3g3352 972 MobiDBLite consensus disorder prediction 1 48 - -
Mal3g3352 972 ProSitePatterns AAA-protein family signature. 845 863 IPR003960 GO:0005524|GO:0016887
Mal3g3352 972 PANTHER - 73 643 - -
Mal3g3352 972 Gene3D - 401 571 IPR027417 -
Mal3g3352 972 Gene3D - 573 690 - -
Mal3g3352 972 Pfam ATPase family associated with various cellular activities (AAA) 743 874 IPR003959 GO:0005524|GO:0016887
Mal3g3352 972 Pfam ATPase family associated with various cellular activities (AAA) 442 571 IPR003959 GO:0005524|GO:0016887
Mal3g3352 972 MobiDBLite consensus disorder prediction 640 658 - -
Mal3g3352 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 701 954 IPR027417 -
Mal3g3352 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 427 684 IPR027417 -
Mal3g3352 972 Pfam AAA+ lid domain 897 942 IPR041569 -
Mal3g3352 972 PANTHER AAA-FAMILY ATPASE 666 968 - -
Mal3g3352 972 PANTHER AAA-FAMILY ATPASE 73 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3352 Mal-Chr3 109954529 109964464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3352 23 970 Calmodulin-binding Proteins AT3G56690 52.907 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3352 - - cam:101494446 1420.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3352 3 109954529 109964464 Mal3g3352 3 109954529 109964464 ECH