Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3351 ATGAGAGAAGAAGATTCAAATTGGTTTTCAAGATGGGAAGAACAACTTCCACCACCAGAAGAACTCATGCCTTTATCACAAACCCTAATCACACCTGATCTCGCCATAGCTTTCGACATACGAAACAACCCTAATCCACCACACACCACCACAATTCCACCACCACCACCACCTTCTTCCCTTCCTTCCTCCACCGATTTCGCCGATTCCGCCGAACTCACCTCCGGCACCGCCGGCGAAGAACCAGCTCGCACTCTCAAACGCCCTCGCCTCGTCTGGACCCCACAGCTCCACAAACGCTTCGTCGACGCCGTGGCTCATCTCGGTATCAAGAACGCTGTTCCGAAGACGATAATGCAGCTCATGAGTGTCGACGGTTTAACAAGAGAAAACGTGGCGAGTCATCTTCAGAAATATCGTCTTTATCTTAAACGCATGCAGGGAATTTCATCCGCCGGTGGTGGTGGTTCCGGTGGTGGCTCCGCTTCTGTTAATGACCCTGCTACTGATCATTTATTTGCTAGCTCCCCTGTACCGCCGCATTTTCTTCATCCGGTAGCGCGGCCGAATTCGGATCATTTTATGCCTTTTGTTCCTGTTCCTGCTATTCATCATCAGCAGCAGATGGCTGCTGCTCAGTATCATCGGCCGGTTGGGCATTTCGGGTCGCCGCCGAATGGACATTTTGATAATCCTTTCTTGTCTAGACAGCAACAGCATCAACAGCAAAATCAGCACCAGCATCAGCAGCAGCTTCATAGAATTGGGGCACAAGTGCATCATAACACTCTAGGTGGTGGTGGTGGTGGTTATGTGGAGGATATGGGATCAGCTAATGCATCAGGAGGGAGAAAGGTTCTTACTTTGTTTCCAACTGGAGATGATTGA 888 0.5011 MREEDSNWFSRWEEQLPPPEELMPLSQTLITPDLAIAFDIRNNPNPPHTTTIPPPPPPSSLPSSTDFADSAELTSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSAGGGGSGGGSASVNDPATDHLFASSPVPPHFLHPVARPNSDHFMPFVPVPAIHHQQQMAAAQYHRPVGHFGSPPNGHFDNPFLSRQQQHQQQNQHQHQQQLHRIGAQVHHNTLGGGGGGYVEDMGSANASGGRKVLTLFPTGDD* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3351 295 MobiDBLite consensus disorder prediction 230 254 - -
Mal3g3351 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 141 IPR006447 GO:0003677
Mal3g3351 295 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 295 - -
Mal3g3351 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 144 IPR017930 -
Mal3g3351 295 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 295 IPR044841 GO:0003700|GO:0006355
Mal3g3351 295 MobiDBLite consensus disorder prediction 39 87 - -
Mal3g3351 295 SUPERFAMILY Homeodomain-like 85 145 IPR009057 -
Mal3g3351 295 MobiDBLite consensus disorder prediction 223 254 - -
Mal3g3351 295 Gene3D - 85 147 - -
Mal3g3351 295 MobiDBLite consensus disorder prediction 151 170 - -
Mal3g3351 295 MobiDBLite consensus disorder prediction 154 170 - -
Mal3g3351 295 Pfam Myb-like DNA-binding domain 92 140 IPR001005 -
Mal3g3351 295 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g3351 295 MobiDBLite consensus disorder prediction 47 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3351 Mal-Chr3 109942765 109943652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3351 1 295 G2-like Transcription Factor Family AT3G10760 53.521 1.92e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal3g3351 Myb_DNA-binding 2.2e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3351 3 109942765 109943652 Mal3g3351 3 109942765 109943652 ECH