Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3346 ATGTGTGGTGAGATTCAAAGCAGCAGCAGTGAACAGAAGAAAGCGGAGGAAGTGATTGTTGGCAACGCCAAAGCTATTGAAAACCTCAGAGATCTCATCACAAAACAGTTCCCAACAGGTTTGTTGCTGTATGGTCCACATGGCACAGGAAAGACCAGTTTAGTACGGGTAATTGTTGAGGAATGTGGAGCAAATTTGATAATTATCAGCCCAAACACTGTTAATAGCGCACATGATGGTGAATATGAGAGAACTCTCTGTGAGGCTTTTTCAGAGGCATCATCTCATGTAGCCTTGGGCAAGTCGTCGGTTATCTTTATTAAAGACATAGATGCAGTTTGCTCTCCCCGAGATTCCAAAGAGAAAGATGTCCGAATTGCTTCCCAACTTTGTACTTTGATGGACTCAAGCAAAGCAACCTCTTCTACGCCCGGGGTACTTGTGGTAGCATCAACTAGCAGGGTGTACGCAATTGATCCTGCCTTAAGAAGGTGTGGACGTTTTGATGTTGAAACTGAAGTTACAGTCCCAAATGAAAAGGAGCGCCTAGAAATTCTAGAGCTGTATACAAGGGAGATCCCTCGGAATTCATGCGACTTAGAATCCATTGCTGCATCATGCAATGGATATGCCGGAGCTGATTTACGGGCTCTGTGTCGTGAAGCTGCCAGATCTGCAGCTAGAAGGTCTTTAAATGTAAAGAAAGATGTTAATGACTCCAGTTTAACGATGGAAGATTGGAAGAATGCAAGGGCTCGTGTTCGACCAAGTATAACAAGAGGCATTACTATGGAAATTCCCAAAGTTACTTGGAAAGATATTGGGGGATTGAAAGACGTGAAGAAAAAGCTCGAGCAAGCTGTTGAGTGGCCTATGAAGTATCCTGCTACGGTTTCAAGATCAGGAATAACCCCTATTCGTGGAATTCTTCTCCACGGGCCTCCAGGATGTTCCAAAACTACTCTTGCTAAAGCTGTTGCAAATGCTGCTAATGTTCCTTTCATTTCCTTGAGTTGTACAGAAATGATTTCAAAGTATGTCGGAGAAGGAGAAGGTTATCTTCGTGAAATATTTTACAAAGCACGGCTTGCCGGAAAAAGTATAATATTTTTCGATGAAGTTGATGCAGTAGCTTGCAAACGGGGTAATATTTCGAGCGGTAATTCCGTAGCTGAAGACAGGGTTTTATCCACTCTGCTAACTGAGATGGATGGTTTAGAAGAAGCCAAAGGAGTCCTTGTTTTGGCAGCTACGAATCGCCCTCATGCTATTGATCCTGCACTTATGCGTCCTGGACGATTTGATCTGATTTTGTATGTGCCACCACCTGATTCGGACGGTCGATTTGAGATACTTAAAGTACACACACGTAGGATGACATTAGGGAGTGATGTTGATCTCAGAAAACTAGCAGAAGATACTGAGCTCTTCACAGGCGCTGATCTAGAGGGATTATGTAGAGAAGTTGGAGTTGTAGCTCTAAGGGAAAACAAGGATGCCAGTGTTGTTTTCGACCGCCATTTTCAGATTACAAAGAATTCTTTAAAATCAGCATTAACAGAAGAAACAAAGAGCTGGTTGTTTCCTTTGTCTTTTGCTGATATGTTACTTGCCACTGCAGCATTGTTTTTTATTTATTCATTTATTTATTGA 1653 0.4241 MCGEIQSSSSEQKKAEEVIVGNAKAIENLRDLITKQFPTGLLLYGPHGTGKTSLVRVIVEECGANLIIISPNTVNSAHDGEYERTLCEAFSEASSHVALGKSSVIFIKDIDAVCSPRDSKEKDVRIASQLCTLMDSSKATSSTPGVLVVASTSRVYAIDPALRRCGRFDVETEVTVPNEKERLEILELYTREIPRNSCDLESIAASCNGYAGADLRALCREAARSAARRSLNVKKDVNDSSLTMEDWKNARARVRPSITRGITMEIPKVTWKDIGGLKDVKKKLEQAVEWPMKYPATVSRSGITPIRGILLHGPPGCSKTTLAKAVANAANVPFISLSCTEMISKYVGEGEGYLREIFYKARLAGKSIIFFDEVDAVACKRGNISSGNSVAEDRVLSTLLTEMDGLEEAKGVLVLAATNRPHAIDPALMRPGRFDLILYVPPPDSDGRFEILKVHTRRMTLGSDVDLRKLAEDTELFTGADLEGLCREVGVVALRENKDASVVFDRHFQITKNSLKSALTEETKSWLFPLSFADMLLATAALFFIYSFIY* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3346 550 Gene3D - 4 177 IPR027417 -
Mal3g3346 550 Gene3D - 259 443 IPR027417 -
Mal3g3346 550 SMART AAA_5 305 444 IPR003593 -
Mal3g3346 550 SMART AAA_5 37 178 IPR003593 -
Mal3g3346 550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 260 IPR027417 -
Mal3g3346 550 PANTHER AAA-FAMILY ATPASE 22 514 - -
Mal3g3346 550 Gene3D - 178 258 - -
Mal3g3346 550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 517 IPR027417 -
Mal3g3346 550 Gene3D - 444 526 - -
Mal3g3346 550 CDD AAA 275 442 - -
Mal3g3346 550 ProSitePatterns AAA-protein family signature. 412 430 IPR003960 GO:0005524|GO:0016887
Mal3g3346 550 Pfam AAA+ lid domain 464 508 IPR041569 -
Mal3g3346 550 Pfam AAA+ lid domain 199 247 IPR041569 -
Mal3g3346 550 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 22 514 - -
Mal3g3346 550 Pfam ATPase family associated with various cellular activities (AAA) 41 174 IPR003959 GO:0005524|GO:0016887
Mal3g3346 550 Pfam ATPase family associated with various cellular activities (AAA) 309 441 IPR003959 GO:0005524|GO:0016887
Mal3g3346 550 CDD AAA 20 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3346 Mal-Chr3 109874894 109880509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3346 241 509 Calmodulin-binding Proteins AT3G56690 48.327 9.07e-81 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3346 - - gmx:100814288 663.299