Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3345 ATGCCTTCTTTGAGTTCGAATCATAGTAGCAGCAATAAGAAGCAATCGAAGTCAATTCTTAATGCCGCCACTCCACCTTTCACCACCGCCGAACCACAACAACTCGCCTCTCTATGCCAAGAAGCTTCTCGAATCTTTCCATCCTTCATTTCAGATTCCGCTTTCGTCGCCGAAATCACCGATATTGAGTCCACCAATGGCGCCAAAATTTGGCTCTCTGAGTCTTCTATGGTTGCTTCTTCTCTAGCTCCGGGTTCACTTGTCTCTGTTTCTATTCCATCTTCAAGTAAAGGAATTGCGCAATTGCATAGTTTTCCTCTCACTTCATTGACTGCTGAGTGTGTCAAATGCTACGGGTTGGAAACTTGTAAGGCATTGGGTGATGCTGCTGCAGGAAACTACTTTGCTATTGCAACGGTTTTTCCTGCCAGGAAGGTATTGAAGAATGGAGTACGCTTGTCTTCAAATATTTCCTTTGCCATGGGACGTCCTCCTTTGGGCACATGTGTGTTTGTTCACCCATTACAGAAACAATCCTTGGTATATAATTGCAAAGAATTATATCTTCAACTGGCTCCTAGTAAGAGTGGACCACATTCGAAAGTTAATAATTTCCCCTCATTGGACTTGTCTAATTCAAAATCATGTGCCCAATCTGAGAATGAAATTGTTGCATCTCCTAAAACACCTTCTAATGGATCAAAGTTTTATAATGATAGTGTGTATTCTTCCCCTCAATATGAAGATTCAGCCTCAAGTGCAACCAATTATAATGAGCAATTGCTGACTTCATTTGATATTAGCAAGGCATTAGGAAATGAAAGTTCCAAAAAATTGCTAGAAAAAAGTGCAACTGCATCGTTATACTCTCGTTGTATATTGCTAGGGAATCTTGTCACTATCCCAATGTTGTCTGAGTTTTTCATTTTCCAAGTGATGGACATTAAGAAGGTGTCAGCTAGCATACCTTGTCCATTAAATGGGAGCAATAATTCAAATCTTGAGGATTCTGATACAGTAGAGAAGGTGAAGGTGGCTTTCAATGTCAATTCGGAAACAAAGGTATTTTTATCTTTGCCATCAAATGCAGCATTTGAAGAGTCAATTCAAAGGGATTTATCTTGTCTGAAACTTGATAGCAGACATGATAATATTTCTAAATTAGGTGGTCTATCTGAAGAAGAAATGTTTTTAAAGGAATTAATCTTTTTTTCAAAGAACAATATTTTATCAAGATTTGGTCATGAGAATACCATAGGAGTCCTTCTTCATGGTCCACCTGGTACGGGAAAGACTTCCCTGGCTCGATTATGTGCTCATGATGCTGGGGTCAATTTTTTCTCAATTGGACCTGAAATTGTTACCCAGTATGGGGAAAATGAGAAAGCATTGCATGAAGTTTTTGATTCCGCACTTCAAGCTGCGCCTGCCGTGATATTTATTGATGAATTACATGCAATTGCTGCTACTGGAAGATTGGTTGTAACCCTATTGAGTCTGATGGACGGAATTAGAGGAAATGAAGGGTTACTTGTAATTGCTGCTACTAATAGGCTTGACCATATTGATCCAGATCTCAGACGATTTGGAAGATTTGACCAGGAAATTGAATTTGGTGTGCCATCAAAAGTGCAACGAGAAGATATTTTGCAGACTATTCTCTGTAAAATAGATCACTCTCTTTCTGAGAAACAAATTGAAGAGCTTGCTTCAATAACTCCTGGATTTGTTGGTGCTGATTTAGTTTTCCTTCGCGATTCGGCAAATAAATTAAAGCAATCCACTCCAGTGAATAGTGTAACAAACTCGAGAGACCATTCAGGAAAGACGCCTGATAGCGGTGAAGAACATATTTCGAAAGTGACTTATGAGGATTTTCAAAAGGCTAGGCTCGAAATAAAACCTAGTGCCATGAGAGAGGTGACCCTTGAGGTTCCAAAGGTTAAATGGGAAGATATTGGCGGCCAAACGGAAGTCAAGAACCAGTTGTTTGAGGCACTAGTATGGCCCCAAAAGCACCGCGACGCATTCGCCCGTATTGGGACTGATCCTCCAACAGGTATATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTATTGGCACGTGCAGTTGCTTCTGAAGCTGGATTGAACTTCCTAGCAGTCAAGGGTCCTGAACTCTTAAGCAAATGGCTTGGCGATTCTGAGAAGAATGTCAAATCATTGTTTGATAAAGCAAGGGCCAATGCACCATCAGTTATATTTTTCGATGAAATTGATAGTCTTGCTGTAACTCGTGGGAAAGATGGTGATGGTGTTTCAGTGACTGATAGGGTCATGGCTCAACTTCTTGTTCAATTGGATGGTGTGTGTAAAAGAGTTGATGTTGCTGTCATAGCTGCTACCAATAGGCCAGAAAATATTGACCCTACTCTTTTAAGACAAGGACGCTTTGACCGTATGCTATATGTTGGACCTCCAAATGAGATGGACAGAGAAGAGATTTTTAGAATTCATTTGCGCAAAATTTCATATGATGTTGTTGTTAGCGTGAAAGAACTGGCTCAACTGACAGATGGTTATACTGGTGCTGATATAGAACTTATATGTAAACAAGCAGCTCTTGCAGCATTGGAGGAAAGCTTTGATGCTTCCATTGCAACAATGAAACACTTTAAGATGGCAATCAAACAAGTTCAGCCCACAGAAACTCAGTCCTATCAAAAGTTGTCAGCAAAATTTCAAAGGGCCGTGTTCTCTGATCACGGCCGGTCCAGAGCAAGTGCTACCAAGTCTGTTGCACAAGGCCTCAAAATTGTAGGGGCCTTCATAATTTTTATTTTTAGTTTTATATATAAGGCCCAAAAACATTGA 2856 0.4037 MPSLSSNHSSSNKKQSKSILNAATPPFTTAEPQQLASLCQEASRIFPSFISDSAFVAEITDIESTNGAKIWLSESSMVASSLAPGSLVSVSIPSSSKGIAQLHSFPLTSLTAECVKCYGLETCKALGDAAAGNYFAIATVFPARKVLKNGVRLSSNISFAMGRPPLGTCVFVHPLQKQSLVYNCKELYLQLAPSKSGPHSKVNNFPSLDLSNSKSCAQSENEIVASPKTPSNGSKFYNDSVYSSPQYEDSASSATNYNEQLLTSFDISKALGNESSKKLLEKSATASLYSRCILLGNLVTIPMLSEFFIFQVMDIKKVSASIPCPLNGSNNSNLEDSDTVEKVKVAFNVNSETKVFLSLPSNAAFEESIQRDLSCLKLDSRHDNISKLGGLSEEEMFLKELIFFSKNNILSRFGHENTIGVLLHGPPGTGKTSLARLCAHDAGVNFFSIGPEIVTQYGENEKALHEVFDSALQAAPAVIFIDELHAIAATGRLVVTLLSLMDGIRGNEGLLVIAATNRLDHIDPDLRRFGRFDQEIEFGVPSKVQREDILQTILCKIDHSLSEKQIEELASITPGFVGADLVFLRDSANKLKQSTPVNSVTNSRDHSGKTPDSGEEHISKVTYEDFQKARLEIKPSAMREVTLEVPKVKWEDIGGQTEVKNQLFEALVWPQKHRDAFARIGTDPPTGILMFGPPGCSKTLLARAVASEAGLNFLAVKGPELLSKWLGDSEKNVKSLFDKARANAPSVIFFDEIDSLAVTRGKDGDGVSVTDRVMAQLLVQLDGVCKRVDVAVIAATNRPENIDPTLLRQGRFDRMLYVGPPNEMDREEIFRIHLRKISYDVVVSVKELAQLTDGYTGADIELICKQAALAALEESFDASIATMKHFKMAIKQVQPTETQSYQKLSAKFQRAVFSDHGRSRASATKSVAQGLKIVGAFIIFIFSFIYKAQKH* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3345 951 PANTHER - 68 588 - -
Mal3g3345 951 MobiDBLite consensus disorder prediction 594 617 - -
Mal3g3345 951 Gene3D - 386 636 IPR027417 -
Mal3g3345 951 SMART AAA_5 684 822 IPR003593 -
Mal3g3345 951 SMART AAA_5 417 542 IPR003593 -
Mal3g3345 951 CDD AAA 420 539 - -
Mal3g3345 951 PANTHER - 604 918 - -
Mal3g3345 951 CDD AAA 673 820 - -
Mal3g3345 951 Pfam ATPase family associated with various cellular activities (AAA) 688 819 IPR003959 GO:0005524|GO:0016887
Mal3g3345 951 Pfam ATPase family associated with various cellular activities (AAA) 421 539 IPR003959 GO:0005524|GO:0016887
Mal3g3345 951 Pfam AAA+ lid domain 843 887 IPR041569 -
Mal3g3345 951 Gene3D - 821 891 - -
Mal3g3345 951 Gene3D - 541 633 - -
Mal3g3345 951 PANTHER AAA-FAMILY ATPASE 604 918 - -
Mal3g3345 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 898 IPR027417 -
Mal3g3345 951 Gene3D - 645 897 IPR027417 -
Mal3g3345 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 594 IPR027417 -
Mal3g3345 951 PANTHER AAA-FAMILY ATPASE 68 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3345 Mal-Chr3 109863370 109871109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3345 616 938 Calmodulin-binding Proteins AT3G56690 65.854 2.45e-144 454