Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3322 ATGATCTTCAATGCATATTGTGCGCTAACCCGTAACCCTCTTCTTCTATCCCGTTCCGTCAACAGCATTTTCCCTAAACACACCCCCCTTCAATTTCGAACAACACCCTCTTCTTCATTCCCCTTCTCTAACCGCTTTCCACTTCCATTCCCTCAATTGCGCATCCGCCATTCTCGCCTCTCCACCCTCCCTCACAATGATCCCGGCGGTTCTGGTGGATTTGGCGGTGATAGTGGCTCTGGAGGATGGGATCCCGGTGACAATGATTCTGACGACGGAGGCGGAAAATGGTCATTCTTGTCATGCATTTCGAAGAAGAAAGACCCTATGAACACACTGGCATCATCTGTTTTGTTGATTTTTGGATTTTGTTCTATTGTTGTCGGTGGTGAAGCTATTCTGGGAGCTCCTCTTCTCCTCCTCTTGTTTACAATGGTTTTTGAAGGCTTTGAGGAAATTTTTAATGGTGCTACAGAGGATGATATCAGGTCACTTCCTATGTTTAGGTTTAGTCAGCCAAATGTAATTGTTATGGTTGATGACAACAGTCAAAGCCATATCAGTGAACTATCTCTTCATCCAGATGATTCTGAGTGCTGTATCTGCCTATGTCCATATGTTGATGGAACAGAACTGTATCGGCTTCCATGTACCCACCATTTTCATTGTGAATGCATCAGTCGTTGGCTGCGGACAAAAGAAACTTGCCCGCTCTGCAAATCTAATATCCGAAGAGGCGATATGTTGGTTTGA 753 0.4502 MIFNAYCALTRNPLLLSRSVNSIFPKHTPLQFRTTPSSSFPFSNRFPLPFPQLRIRHSRLSTLPHNDPGGSGGFGGDSGSGGWDPGDNDSDDGGGKWSFLSCISKKKDPMNTLASSVLLIFGFCSIVVGGEAILGAPLLLLLFTMVFEGFEEIFNGATEDDIRSLPMFRFSQPNVIVMVDDNSQSHISELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHCECISRWLRTKETCPLCKSNIRRGDMLV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3322 250 PANTHER TARGET OF ERK KINASE MPK-1 91 154 - -
Mal3g3322 250 SUPERFAMILY RING/U-box 191 244 - -
Mal3g3322 250 PANTHER RING-FINGER UBIQUITIN LIGASE 153 250 - -
Mal3g3322 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 247 IPR013083 -
Mal3g3322 250 ProSiteProfiles Zinc finger RING-type profile. 199 240 IPR001841 -
Mal3g3322 250 MobiDBLite consensus disorder prediction 61 92 - -
Mal3g3322 250 Pfam Ring finger domain 198 240 IPR001841 -
Mal3g3322 250 PANTHER RING-FINGER UBIQUITIN LIGASE 91 154 - -
Mal3g3322 250 PANTHER TARGET OF ERK KINASE MPK-1 153 250 - -
Mal3g3322 250 SMART ring_2 199 239 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3322 Mal-Chr3 109418049 109421149 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3322 87 247 C3H Transcription Factor Family AT1G68070 34.975 1.62e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3322 - - mtr:MTR_7g088560 199.519