Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3315 ATGGAAGAAAGACAACCCGAGCAAGAACAACAACAACAACGCCAGGTCATCACTGTCGGAACTCACAACCCTCTCCTCCGCATGCCTCGATCGGAGAACGATGAAGACGACGGAGCATGCGCCTATTCAAGGGCGGTGCTGGTGGTCGACATGGTCTGGAACCTCGCCTTTGTGGTGGTTGCCGCCGCTGTTATCCTCTCTACTTTCGCCGAGCGTCCTTCTACTCCTCTCAGACTTTGGCTCTGTGGCTATGCCTTCGAGTGTCTTCTCCATGTGGCTTTTGTTTACTCTGAATTTCGTGACACTTCTCGTGATTCCTTCTCTCACACTCCTTACAGCATTGCGAAGAAGTTAGAGCCAATGAACACACTGTCATCATCTGTTTGGTGGGTTTTTGGATTTTATTGGATTGTTGTCGGTGGCCAACCACTTCTCGAAGATTCTCCTCGTCTGTACTGGTTAACAGTGGTCTTTCTAGCCTTTGACGTATTTTTTATTATCTTTTGCATCGGGATGGCATGTATAGTTTTCTTTGCTCTGTTCTGTATCATCCCAATTATAGCGTTAGCTTATGCTTTAAGAATCAGAGAAGGTGCTTCGGAAGATGATATCAGGTCACTTCCTATGTATAGGTTTAGTCAGTCAAATGTAATGGTTATGGTTGATAACTACAAGAAGCAACTTGTCAAAGCAGGATTCGGTTCATACAGTCCAAGCCATAGCAGTGAACTACCTCTTCATCCAGATGATTCTGAATGCTGTATTTGCCTTTGTCCATATGTTGATGGAACAGAATTATATCGCCTTCCATGTACCCACCATTTTCATTGTGCATGCATCAGCCGTTGGCTTCGGACAAAAGCAACTTGCCCACTCTGCAAATTTAATATCCGAAGAGGCGATACATTGGTTTGA 915 0.4514 MEERQPEQEQQQQRQVITVGTHNPLLRMPRSENDEDDGACAYSRAVLVVDMVWNLAFVVVAAAVILSTFAERPSTPLRLWLCGYAFECLLHVAFVYSEFRDTSRDSFSHTPYSIAKKLEPMNTLSSSVWWVFGFYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIALAYALRIREGASEDDIRSLPMYRFSQSNVMVMVDNYKKQLVKAGFGSYSPSHSSELPLHPDDSECCICLCPYVDGTELYRLPCTHHFHCACISRWLRTKATCPLCKFNIRRGDTLV* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3315 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 301 IPR013083 -
Mal3g3315 304 Pfam Ring finger domain 252 294 IPR001841 -
Mal3g3315 304 PANTHER TARGET OF ERK KINASE MPK-1 21 304 - -
Mal3g3315 304 ProSiteProfiles Zinc finger RING-type profile. 253 294 IPR001841 -
Mal3g3315 304 PANTHER RING-FINGER UBIQUITIN LIGASE 21 304 - -
Mal3g3315 304 SMART ring_2 253 293 IPR001841 -
Mal3g3315 304 SUPERFAMILY RING/U-box 246 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3315 Mal-Chr3 109358741 109362079 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3315 4 301 C3H Transcription Factor Family AT1G68070 43.302 7.58e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3315 - - gmx:100808066 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3315 3 109358741 109362079 Mal3g3315 3 109358741 109362079 ECH