Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3307 ATGGATCATAATTTGGGTCAAGAATCTGCTCCTGCAGCTGATAAGTCTAGGGTTTTAAATGTTAAGCCATTGAGGACTCTTGTTCCGGTGTTCCCTTCACCGTCGAACCCTTCATCGTCTTCAAATCCACAAGGTGGTGCTCCTTTTGTTGCTGTTTCTCCTGCTGGTCCTTTCCCTGCTGGTGTTGCACCCTTTTACCCTTTCTTTGTCTCGCCGGAGTCTCAGAGGCTTTCTGAACAACATGCACCGAACCCAACTCCTCAACGTGCCACACCGATATCTGCTGCAGTTCCAATTAATTCATTCAAGACTCCGACTGCGGCGACAAATGGAGATGTAGGTTCGTCCCGGAGGAAAAACCGGAGTCGTGGTGGACAACTCACGGAGGAAGAAGGCTACGGTAATGCTGAAGTTGATGTAGAAGGTGGAACTGGGGGCGGGAGTTCAAAGCGCAAGAAGAGGGGAAGGGGACGACCGCCTAGCGGTGTTGCTACCGATGGGAGTGGTGTGGCTGCTGTTGAGGTTGATCTAGATGCGGTGGCTCATGATATTCTCCAATCAATTAACCCCATGGTTTTTGATGTAATAAATCATCCTGATGGTAGCAGGGACTCGGTGACATATACACTTATGATATATGAAGTGCTGCGAAGAAAGCTTGGACAAATTGAAGAGTCAACAAAGGACACTCATACTGGAGCGAAGCGACCTGATTTGAAGGCAGGCAATGTTATGATGACTAAAGGGGTCAGAAGTAACAGCAAGAAAAGGATTGGCATTGTGCCTGGTGTTGAGATTGGGGATATTTTCTTTTTCCGATTCGAGATGTGCTTAGTGGGATTGCATTCACCTTCTATGGCTGGAATCGATTACCTGGGTTCCAAAGCAAGTCAAGAGGAAGAGCCATTAGCTGTTAGTATTGTCTCATCTGGAGGATATGAAGATGATACAGGCGATGGGGATGTGTTGATTTATAGTGGCCAAGGTGGAGTTAATCGCGAAAAGGGTGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGAAAAGAGCATGCATAGAGGTAACGATGTGAGAGTCATTAGGGGTTTGAAGGATGTAATGCATCCATCTGGGAAGGTATATGTCTATGATGGTATTTATAAGATTCAGGATTCATGGGTGGAGAAAGCAAAGTCCGGTTTCAATGTATTCAAGTATAAATTAGCGAGGGTGCGTGGACAGCCTGAAGCATATACAATATGGAAATCCATTCAACAATGGACCGATAAGTCGGCTCCAAGAACAGGGGTTATATTGCCTGATCTTACTTCTGGGGCTGAAAAAGTACCTGTTTGTCTTGTTAACGATGTTGATAACGAGAAGGGCCCTGCATATTTCACTTACATCCCTACTCTCAAGAATTTGAGGGCAGTTGCTCCTGTGGAATCTTCATCTGGTTGTTCTTGTATCGGTGGATGTCAACCTGGCAATTTTAACTGTCCCTGCATTCAAAAGAATGGAGGTTATCTCCCGTATTCTGCAGCCGGGTTAGTTGCGGACCTAAAATCCGTGATACATGAGTGTGGTCCTTCCTGTCAGTGTCCTCCTACTTGCCGAAGCCGGGTTTCCCAAGGTGGCCTAAAATTTCGTTTAGAGGTGTTTAGAACCCATAACAAAGGTTGGGGCCTAAGATCGTGGGATGCTATTCGTGCTGGAACTTTTATATGTGAGTATGCAGGGGAAGTCATAGATAATGCTAGAGCGGAGATGCTTGGTGGTGAAAATGAAGACGAGTATATTTTTGATTCTACTCGCATCTATCAGCAGCTGGAAGTTTTTCCTGCTGATATTGAAGCTCCAAAGATTCCATCCCCACTTTATATAACAGCGAAGAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTGTTGTGGCGTCCGATTGTACGTGAAAATAAGAACGAATCGGATCTCCACATTGCTTTCTTTGCAATTAGACACATCCCTCCTATGATGGAGTTAACTTATGATTATGGGATAAATCTTCCTCTCAAGGCAGGTCAAAAGAAAAAGAAATGCTTATGTGGATCTGTGAAATGCAGGGGTTACTTTTGTTAA 2118 0.449 MDHNLGQESAPAADKSRVLNVKPLRTLVPVFPSPSNPSSSSNPQGGAPFVAVSPAGPFPAGVAPFYPFFVSPESQRLSEQHAPNPTPQRATPISAAVPINSFKTPTAATNGDVGSSRRKNRSRGGQLTEEEGYGNAEVDVEGGTGGGSSKRKKRGRGRPPSGVATDGSGVAAVEVDLDAVAHDILQSINPMVFDVINHPDGSRDSVTYTLMIYEVLRRKLGQIEESTKDTHTGAKRPDLKAGNVMMTKGVRSNSKKRIGIVPGVEIGDIFFFRFEMCLVGLHSPSMAGIDYLGSKASQEEEPLAVSIVSSGGYEDDTGDGDVLIYSGQGGVNREKGASDQKLERGNLALEKSMHRGNDVRVIRGLKDVMHPSGKVYVYDGIYKIQDSWVEKAKSGFNVFKYKLARVRGQPEAYTIWKSIQQWTDKSAPRTGVILPDLTSGAEKVPVCLVNDVDNEKGPAYFTYIPTLKNLRAVAPVESSSGCSCIGGCQPGNFNCPCIQKNGGYLPYSAAGLVADLKSVIHECGPSCQCPPTCRSRVSQGGLKFRLEVFRTHNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGGENEDEYIFDSTRIYQQLEVFPADIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNESDLHIAFFAIRHIPPMMELTYDYGINLPLKAGQKKKKCLCGSVKCRGYFC* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3307 705 ProSiteProfiles Post-SET domain profile. 689 705 IPR003616 -
Mal3g3307 705 Pfam SET domain 555 679 IPR001214 GO:0005515
Mal3g3307 705 Pfam SAD/SRA domain 258 409 IPR003105 -
Mal3g3307 705 Pfam Pre-SET motif 438 536 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g3307 705 SUPERFAMILY SET domain 420 685 IPR046341 -
Mal3g3307 705 MobiDBLite consensus disorder prediction 31 47 - -
Mal3g3307 705 SMART G9a_1 254 409 IPR003105 -
Mal3g3307 705 Gene3D - 241 425 IPR036987 -
Mal3g3307 705 SMART set_7 544 685 IPR001214 GO:0005515
Mal3g3307 705 ProSiteProfiles Pre-SET domain profile. 480 541 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g3307 705 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 10 704 - -
Mal3g3307 705 ProSiteProfiles YDG domain profile. 259 405 IPR003105 -
Mal3g3307 705 SMART preset_2 434 528 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g3307 705 Gene3D SET domain 426 704 IPR046341 -
Mal3g3307 705 SUPERFAMILY PUA domain-like 241 423 IPR015947 -
Mal3g3307 705 MobiDBLite consensus disorder prediction 74 167 - -
Mal3g3307 705 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 704 IPR025794 GO:0016571
Mal3g3307 705 MobiDBLite consensus disorder prediction 74 115 - -
Mal3g3307 705 MobiDBLite consensus disorder prediction 27 54 - -
Mal3g3307 705 ProSiteProfiles SET domain profile. 544 679 IPR001214 GO:0005515
Mal3g3307 705 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 10 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3307 Mal-Chr3 109250557 109252674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3307 14 704 Su(var)3-9 homologs AT1G73100 47.961 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal3g3307 SAD_SRA 5e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3307 K24405 - gmx:100805932 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3307 3 109250557 109252674 Mal3g3307 3 109250557 109252674 ECH