Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3302 ATGGAAAAACGGAGCAGGTTGGTTTTTGTTTCAGATTTTGTTCTGTCTTTCATGTGGGTATGGTCTGGTATTCTCGTTCGATTATTCGTCTTCAAAATTCTTGGTTTTTCTCATACCCATCTTGGTGAGATTGTAAAGATTTTATTTTCCATCCTCAACATGTTCTTCTTTGCTTTCCTTGCAAAGGTTTCTCGTGGTGGGGTCTACAATCCTCTCACTGTTTTGTCTGATGCTATCTCTGGTGATTTTCGTAACTTCCTTTTCTGCGTTGGTTCCAGAATTCCTGCCCAGGTGTTTGGATCTATTGTTGGAGTTAAACTTCTTATTGAAACCATTCCCGAAGTAGGACAGGGACCGCGTTTGAATGTTGACATTCATCAAGGAGCATTGACAGAAGGATTACTTACATTTGCAATTGTAAGCATTTCACTTGGGCTTGCCGCAACAAAAATTCATGGAAATTTCTTCATGAAGACTTGGATTTCTAGCCTCTCCAAGTTAACACTTCATATACTTGGTTCTGATCTGACCGGTGGTTGTATGAACCCCGCAGCCGTAATGGGATGGGCTTATGCTCGAGGGGATCACATAACAAAGGAACACATCCTTGTATACTGGCTTGCCCCTATAGAGGCAACTATTTTCGCAGTGTGGACATTCAAATTTATCGTCCGACCTGTTATAGAAGATAAAACAAGCTCAAAAAGTAAATCAGATTGA 720 0.4069 MEKRSRLVFVSDFVLSFMWVWSGILVRLFVFKILGFSHTHLGEIVKILFSILNMFFFAFLAKVSRGGVYNPLTVLSDAISGDFRNFLFCVGSRIPAQVFGSIVGVKLLIETIPEVGQGPRLNVDIHQGALTEGLLTFAIVSISLGLAATKIHGNFFMKTWISSLSKLTLHILGSDLTGGCMNPAAVMGWAYARGDHITKEHILVYWLAPIEATIFAVWTFKFIVRPVIEDKTSSKSKSD* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3302 239 PANTHER AQUAPORIN SIP2-1-RELATED 7 239 IPR044226 GO:0015267
Mal3g3302 239 Pfam Major intrinsic protein 9 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g3302 239 Gene3D Glycerol uptake facilitator protein. 5 238 IPR023271 -
Mal3g3302 239 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g3302 239 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g3302 239 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g3302 239 PRINTS Major intrinsic protein family signature 131 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g3302 239 PRINTS Major intrinsic protein family signature 163 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g3302 239 PANTHER AQUAPORIN SIP2-1-RELATED 7 239 - -
Mal3g3302 239 SUPERFAMILY Aquaporin-like 8 231 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3302 Mal-Chr3 109217371 109221095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3302 10 239 Major Intrinsic Protein MIP AT3G56950 62.338 3.50e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3302 K09875 - gmx:100786138 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3302 3 109217371 109221095 Mal3g3302 3 109217371 109221095 ECH