Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3301 ATGGATTTTTGTATGGAACTATCAAAAGGAGCTGTCTCGAAACTTGGAGAACTGGGAGTGGAGTCTATCCTGAAGCAATTTAAATATATGATCCAATACAAAAAGATTATTGCCAATTTGAATGTAGAACACAAGAACTTGGATTCTTTGAGACAATCATTGCAAGGGTGGGTGGATGCAGAAAACACGAAAGGAAACGAAATTCCACGTAACATGTTGAAATGGCTCTCCGACGAGGCAGAAATTGAAGTCGCGTTACAAAGCTTCTATGAAAACAAAGTTAACAAGACCAAGAAATGCTTTTGGGGCCAATGTACAGATTTGGCATTTAATTACTCGCTGGGTAAGCAAGCAACTAAGAAAATAGAAGATATTACAAGATTGAAGGAGGAAAGAACCAAACTTTTACTTATATCCTACCGTAAAGCTGCACCAGCACTTGGATCGACCTTCATAGAAGATTATAAGAGTTTGGAATCCAGAAACAAAATTATACAAACACTCATAGAGAAGTTGAAGGATGATCAGCTCAAAAGGATTGGCATTTGTGGGATGGGTGGAGTGGGAAAAACCACACTTGTGAAAGAACTCATCAAAAATGTAGAGCATAAGTTATTTGATAAAGTTTTGATGGCTGTTGTATCCCAAAATCCTGATTATGAGAAGGTTCAAAGACAAATTGCTGATGGTTTAGGTTTGGAGTTAAAAGGGCAGAGCATAGAAGGAAGGGGTTGGGAAATATTTCAAAGGTTTAAAGAATTTGAAGAGAAGAAGGTTAAGGTGCTAATAGTCTTAGATGATGTGTGGAAAGAGCTTAATTTTGAGTGGATAGGACTTTCTTCTCAAGACCACCAGAAATGTATAAAAATATTATTCACATCACGAGATGTAAAAGTGTGCCAAAAGAATAGAAGCCAATATAATGAACTTGTCTCTAAGTTGCTAGACGATGAAGCTTGGAGCCTATTTCGAGATATGGCTGGAGATGTTGTAAACAAACCTGATATTCATCCAATAGCAAGAGAGGTTGCAATGGAATGTGGTGGTTTGCCCCTTGCAATTGCGACAATTGGACGTGCACTTGGCAATGAGGAAAAGAGTACGTGGGAGGTTGCCCTTCAACAACTGAGAGACCCTCAGTCAACTCCCATCTTAGACATGGAGGAACGTGTTTATTCACGTATTGAACTTAGCTTCAACTTTTTGGGTAGTGTAGAACACAAGTCTTGCCTTTTCCTTTGTGGATTGTTTCCAGAGGACTTTGACATTCCTGTTGAAAGTCTACTGCGTCACGGGATTGGCTTGGGGTTGTTTAAGAAAACTTATAATGTTTTGAAAGCAAGAAATCACATAAATTATTTGGTGAGCAATCTGAAAAATTGTTTCCTATTATTAAACAGTAAAGAGCCAGGGTGTGTAAAGATGCATGATGTTGTGCGTGACGTTGTCCTAAAAATTTATTTTAGAGAAGAACTTGGTATTTTGGTGCAGAGTAATGCTGAATTGCAGGAGGTGAAACAGAAACAAGAAAAATGCCTTAGAATGTCGCTTATTTTGAATGAGGAGATTGAGTTAGAAAGTGCCCTACAATGTCCAACACTAGAGCTTTTACAAGTGCAATCACAAAGAGAAATGGGAGATATGACTTTTTGGCGAGAGAACTTCATCCATGAACTGACTAAACTCAAAGTTTTATATATTCAAAATTTGTGCATTCCAAAAACATCATCTCATTTTCATGCCTCGATCAACACCTCGGTCAACCTTCACACATTGCAACTAGAAGGATGTGATGTTGGGGATATATCTGTAATTGGTAAAGAGATCAAGAAACTAGAAATCCTAAGCTTTGCCAACTCAAACATTGAAGAACTTCCAGCTGAAATTGGGAATCTGAGATTTCTCAAATTATTGGATTTGACAGGATGTGATTATCTTAATTTTATTTCTCCTAATGTCTTAGCAAGGTTATCAAGATTGGAAGAGTTTTATTTTAGGATAAAAAACTTTCCTTGGTTGCTAAACAAAGAAGTTCTCAAAGAGTTAAGAAATCTTTCTCCACAGTTGAAGGTTCTTGAGATCAAAGTAAGGAAGGCGGAAATTTTACCAGGTGATATGGATTTCAAAAACCTAGAACATTTTTGGGTTTATGTTGTTCCTTGTGCTTCTTATGAGCGTCGTGGATATTTGGAGCCAAATACAATACAATTAAGAGCCTTAGATTACAACTCTATTAAGAGTAGTATGATGACCATGCAACTAGTCAAGAAATGTGAAATTCTCATATTGGAAAAAGTGAAGGACTTGAAAAATGTCATATCTGAATTAGATGATTGTGGACTCCAATGTGTGAAAGATTTAAGGCTTGATTCATGCCCCAACCTTGAGTGTGTCATAGATTGCAATACTTCTTTGTCTGCCTTTCCATTGATCAGGTCATTGTCTTTATCGAATCTTGACGAGATGAGGGAAATTATCCGTTCACCTGATCACCGTGAAACCACAAAAGCAATTATCAAATTCTCAAATTTAGAGAAATTGGAGCTGAAGTACCTCGACAAGATGATTGGCTTTACAAACTCCAGTTATTTGAACGAGCACCACCAACCAATTCATCATGGATTGAGTTCTACAACTAAATTAACTGATTCAACAAACATTGAGGATAGCTGTAGATCCTCATCAGTTAGTGCCAAGTTGTTTTCATCTAATTGGATCAAACAATTTCCAAAATTGGAAATAATGGTGTTAGAATACTGTATTTCGATAGAGATGGTATTTGACTTGGAAGGATATTCAGAATCTAGCGGTGTTGTACTAGATTCTTGTTTGTTTCCCCAACTAAGAGAACTTGAGATATCAGACATGAAGAATCTAACATATGTTTGGGGAAATGTTCCATATTGTGTTCAGGGCTTTCATAATTTGAGACTTCTAACAATCTCAAATTGTGGCTCTTTAAAATATGTGTTTACTTCTGTCATTGTTAGAGCAATCACAAATCTTGAGGAATTGAGTGTAAGCTCTTGTGAAATGATTGAGAACATCGTGATATGGACCAGAGATGGTAAAGAGGATGACAATATCAAAGATGTGGCAACTATTGGGTTTAATAAACTATGTTCTTTATCACTTTTAAAACTTCCAAGGCTTGTGAATATCTGTTCAGATTCTGTTGAGTTAGAATGTCCATTATTGAGGGAATTTAAGATTGATGGTTGTCCTATGTTGGAGATATCTTTATCACCAACCCATAACCATGCAAATCAAGAGAACCTCAACAAGGTCACATATTCAGCAAATAAAGAAGATGATAATATTGAAGTAAACAACTCAAGCTCTTCAACTTGCCCCCCTACCGGGTGTACTCCTTTTCTGTCTAAATTTTTTCTCAAAGGGAACACATATAAGAGAATTAATAAGGAAGTATCAATAACACGAGCACCAGAGGATCATATACCTTCTAATTTTGAAATGAAGATCAAGAAAGGAAAAAGTCATATGCCTGTTCTAGAAGACCTACACATAGTAAAATGTGATTCCCTGGATTTTGTATTTTTTCACAATGAAAAATTCAATTTCGCAGTTCCATCACACCTGAAAACCATCAAAATTGAAAAGTGTGACAAGTTAAAGACAATAATGGCCAGAACAGAAAATAGAGAAGACATGACAAACTCTTTTACTCAGTTAGAGTCTCTTCACTTGGTAGATCTTCCAAATCTTGTGAAGTTTAGCGTTTGTGGACCATATGAGTTATGGGACAACCAACAAGACAAGGATGAATGTGTGGACGATCTTGAAACTATTAGATGTCATCCACTCATGGATGAGTCCTTGTTTCCAAACTTAACTTCTTTGTTCATAGAATCTTGCAACAAAATTAGCATCTTGATCTCTCATTCATCCTTGGGGAGTCTTGAGCATCTTGAAATCCTAGTTGTACGAAATTGCAAGAACATACAAGAAATAGTATCTCTAGAAGAAAGTTCAAATAAGATTATGTTCAATAAGTTGAGTTATCTATTTCTTGAGAAGCTACCCAACCTTAAATCCTTTTGCCGAAGTTCCTATAATTTCTTTTTCCCATCATTGCAAAAAGTGAAAATTAAATATTGTCCCAATATAGAAGATTTTTCACTAGGATCTTCTGCTACAGCTATGCTTGTGGATGTTGCAATGAAGCAATCATCACTCAAAATTAAAGGCTATATACAGAAGAGAGACATCAATGATATTGTCCGAGGATTTAAAGCATTTGTGGCATCACAAGGATCCAAGAAGTTGAGCTGGACCATTTTGCATAATGAAGGATACTTCATCAAAAACTCAAAAATAAATATCAAAGAATTTCATGAACTGTTGTTTCTTGTTCCGTTCAATAAAATACAAATGCTTCAACATGTGGAGGAACTCACTGTAAGTAATTGTGATTCACTAGTTGAGGTGTTTGAATCAGGAGGAGAAGGTACAAGAGAAGGGGGTGTCAACACACATTATCAACTACAAAATATGATATTGGTTCATTTGCCAAATTTGAGTCACATATGGAAACACAATATTGTGGAGGTTATAAGCTTCCAGAAGCTTACAAATATTGTTGTTTTAGATTGCCACAGTTTGAAGAGTTTGTTCTCTCATTCCATTGCCATAAGCCTTGTGCAACTTCAAAAATTAGAAGTTGCAGATTGTGACATGATGGAGGAGATTGTTACAAAGGAAGACGGGAATACTGAAGAAGGCAGCAAAGTCAAGATTTTATTTCCTAAATTGGAGGAATTGAGGCTTGACAATCTTCCTAACTTGGACAGTGTTTGTTCAGGAGATTATGACTATGATCTACCTTTGTGTACTATTAAAGAGGACATGAAATTCAATAATAATGATAGGGTTCAGATTTCATTTCCACAATTAAAGGAGATAGAGCTTAGTAGAGTACCGAAACTCAAGTGCTTTTGTTCAGGAGCATATGACTACAATATCATGTTGTCATCAGTTAAAGAGTGTTCAAATATGACAACCTTTCCCGATGGAAATGTTATTGTTAACACACCCAACCTTCATAATCTAAAGTGGAATTGGGTTGATATACAAACACTTGGAGACCTAAATTTGGCAATATGTTATGTTAAAAATTCAAAGAAATACAAGGTGGAGTTGCAAAAATTAGAGACATTTACAGATATCAATGGAGAGCTTAAAGAGTACATCAAAAGAGTAACAGAGTTTGACATTGTAAACTGTCACAGTCTATTGAATGGCATCCCATCCGACAAGATGGACTTATTCTCACATTTGAAGGAACTCTTTGTGGAAGAATGTGAGTGCTTGGGAGAGATATTTGAATCAAATGATAGCATGTTGCAGTGTGAACTATATCTCTTAGAATTGTCCTCTCTTCCAAAACTGAAGCACATTTGGAAAAATGATGGTCAAATTTTAGGATTCGAGTGTTTAGAAACAATAACGATCAAGCACTGCAATGATTTGGAATATGTTTTTCCCGATGTTTCCATGGTCACAAGCCTTCCATATTTAGCTTCGATTAATGTGTATGATTGCGAGAAGATGGAGGAGATCATTGGGAATAATTGCAATCCTATTAATTGTGTACAACAGAAAGCTAAGATTAAATTCCCATCATTATGGGAAATTAAACTAGAGAAGCTTCCTAGCCTCAAATGTTTCAGTCAAAGCTCTTTCCCTTGCTATGTTGAGATGCCAGAATGTGAGTATATTACAATTGAAGATTGTCCAGAGATGAAGACATTTTGGTATGAAGGAATCCTATACACACCACGTCTTAATGAAATTTCTGTAGAAAATACCAAATTTGACACAGACGAAGATGTTAACGAGGTGATACAACGAACAATAAATGATTGA 5886 0.3602 MDFCMELSKGAVSKLGELGVESILKQFKYMIQYKKIIANLNVEHKNLDSLRQSLQGWVDAENTKGNEIPRNMLKWLSDEAEIEVALQSFYENKVNKTKKCFWGQCTDLAFNYSLGKQATKKIEDITRLKEERTKLLLISYRKAAPALGSTFIEDYKSLESRNKIIQTLIEKLKDDQLKRIGICGMGGVGKTTLVKELIKNVEHKLFDKVLMAVVSQNPDYEKVQRQIADGLGLELKGQSIEGRGWEIFQRFKEFEEKKVKVLIVLDDVWKELNFEWIGLSSQDHQKCIKILFTSRDVKVCQKNRSQYNELVSKLLDDEAWSLFRDMAGDVVNKPDIHPIAREVAMECGGLPLAIATIGRALGNEEKSTWEVALQQLRDPQSTPILDMEERVYSRIELSFNFLGSVEHKSCLFLCGLFPEDFDIPVESLLRHGIGLGLFKKTYNVLKARNHINYLVSNLKNCFLLLNSKEPGCVKMHDVVRDVVLKIYFREELGILVQSNAELQEVKQKQEKCLRMSLILNEEIELESALQCPTLELLQVQSQREMGDMTFWRENFIHELTKLKVLYIQNLCIPKTSSHFHASINTSVNLHTLQLEGCDVGDISVIGKEIKKLEILSFANSNIEELPAEIGNLRFLKLLDLTGCDYLNFISPNVLARLSRLEEFYFRIKNFPWLLNKEVLKELRNLSPQLKVLEIKVRKAEILPGDMDFKNLEHFWVYVVPCASYERRGYLEPNTIQLRALDYNSIKSSMMTMQLVKKCEILILEKVKDLKNVISELDDCGLQCVKDLRLDSCPNLECVIDCNTSLSAFPLIRSLSLSNLDEMREIIRSPDHRETTKAIIKFSNLEKLELKYLDKMIGFTNSSYLNEHHQPIHHGLSSTTKLTDSTNIEDSCRSSSVSAKLFSSNWIKQFPKLEIMVLEYCISIEMVFDLEGYSESSGVVLDSCLFPQLRELEISDMKNLTYVWGNVPYCVQGFHNLRLLTISNCGSLKYVFTSVIVRAITNLEELSVSSCEMIENIVIWTRDGKEDDNIKDVATIGFNKLCSLSLLKLPRLVNICSDSVELECPLLREFKIDGCPMLEISLSPTHNHANQENLNKVTYSANKEDDNIEVNNSSSSTCPPTGCTPFLSKFFLKGNTYKRINKEVSITRAPEDHIPSNFEMKIKKGKSHMPVLEDLHIVKCDSLDFVFFHNEKFNFAVPSHLKTIKIEKCDKLKTIMARTENREDMTNSFTQLESLHLVDLPNLVKFSVCGPYELWDNQQDKDECVDDLETIRCHPLMDESLFPNLTSLFIESCNKISILISHSSLGSLEHLEILVVRNCKNIQEIVSLEESSNKIMFNKLSYLFLEKLPNLKSFCRSSYNFFFPSLQKVKIKYCPNIEDFSLGSSATAMLVDVAMKQSSLKIKGYIQKRDINDIVRGFKAFVASQGSKKLSWTILHNEGYFIKNSKINIKEFHELLFLVPFNKIQMLQHVEELTVSNCDSLVEVFESGGEGTREGGVNTHYQLQNMILVHLPNLSHIWKHNIVEVISFQKLTNIVVLDCHSLKSLFSHSIAISLVQLQKLEVADCDMMEEIVTKEDGNTEEGSKVKILFPKLEELRLDNLPNLDSVCSGDYDYDLPLCTIKEDMKFNNNDRVQISFPQLKEIELSRVPKLKCFCSGAYDYNIMLSSVKECSNMTTFPDGNVIVNTPNLHNLKWNWVDIQTLGDLNLAICYVKNSKKYKVELQKLETFTDINGELKEYIKRVTEFDIVNCHSLLNGIPSDKMDLFSHLKELFVEECECLGEIFESNDSMLQCELYLLELSSLPKLKHIWKNDGQILGFECLETITIKHCNDLEYVFPDVSMVTSLPYLASINVYDCEKMEEIIGNNCNPINCVQQKAKIKFPSLWEIKLEKLPSLKCFSQSSFPCYVEMPECEYITIEDCPEMKTFWYEGILYTPRLNEISVENTKFDTDEDVNEVIQRTIND* 1962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3301 1961 PANTHER - 1628 1685 - -
Mal3g3301 1961 SUPERFAMILY L domain-like 908 1246 - -
Mal3g3301 1961 Gene3D - 313 396 IPR042197 -
Mal3g3301 1961 Coils Coil 155 175 - -
Mal3g3301 1961 SUPERFAMILY RNI-like 1281 1607 - -
Mal3g3301 1961 Gene3D - 143 310 IPR027417 -
Mal3g3301 1961 SUPERFAMILY RNI-like 1738 1952 - -
Mal3g3301 1961 PANTHER - 1550 1626 - -
Mal3g3301 1961 PANTHER - 7 1386 - -
Mal3g3301 1961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 414 IPR027417 -
Mal3g3301 1961 Gene3D Ribonuclease Inhibitor 1444 1660 IPR032675 -
Mal3g3301 1961 Gene3D Ribonuclease Inhibitor 1267 1397 IPR032675 -
Mal3g3301 1961 Gene3D Ribonuclease Inhibitor 1661 1861 IPR032675 -
Mal3g3301 1961 Gene3D Ribonuclease Inhibitor 832 1024 IPR032675 -
Mal3g3301 1961 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1550 1626 - -
Mal3g3301 1961 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 1386 - -
Mal3g3301 1961 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1628 1685 - -
Mal3g3301 1961 SUPERFAMILY L domain-like 490 850 - -
Mal3g3301 1961 Pfam NB-ARC domain 162 399 IPR002182 GO:0043531
Mal3g3301 1961 Gene3D Ribonuclease Inhibitor 525 719 IPR032675 -
Mal3g3301 1961 PRINTS Disease resistance protein signature 179 194 - -
Mal3g3301 1961 PRINTS Disease resistance protein signature 630 646 - -
Mal3g3301 1961 PRINTS Disease resistance protein signature 347 361 - -
Mal3g3301 1961 PRINTS Disease resistance protein signature 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3301 Mal-Chr3 109205709 109212604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3301 169 490 WRKY Transcription Factor Family AT5G45050 24.702 2.29e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3301 - - cam:101509145 2014.58