Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3300 ATGGATTTTTGTACGGAACTATCAAAAGGAGCTGTCTCGAAACTTGGAGAACTGGGAGTGGAGTCTACCCTGAAGCAATTTAAATATATGATCCAATACAAAAAGATTATTGCCAATTTGAATGTAGAACACGAGAACTTGGATTCTTTGAGACAATCATTACATGGGTGGGTGGTTGCAGAAAACACGAAAGGAAACGAAATTCCACGTAACGTGTTTAAATGGCTCTCCGACGAGGCAAAAATTGAAGCCGCGTTACAAAGCTTCTATGAAAACAAAGTTAACAAGACCAAGAAATGCTTTTGGGGCCAGTGTACAGATTTGGCATTTAATTACTCGCTGGGTAAGCAAGCAACTAAGAAAATAGAAGATATTACAAGATTGAAGGAGGAAAGAACCAAACTTTTACTTATATCCTACCGTAAAGCTGCACCAGCACTTGGATCGACCTTCATAGAAGATTATAAGAGATTGGAGTCCAGAAACAAAATTATACAAATGCTCATTAATAAGTTGAAGGATGATCAGATCAAAAGGATTGGCATTTGTGGGATGGGTGGAGTGGGAAAAACCACACTTGTGAAAGAACTCATCACAACTGTAGAAAATAAGTTATTTGATAAAGTTGTGGTGGCTGTTGTATCCCAAAATCCTGATTATGAGAAGATTCAAAGACAAATTGCTGATGGTTTAGGTTTGGAGTTAAAAGGGCAGAGCATAGAAGGAAGGGGTTGGGAAATATTTCAAAGGTTTAAAGAATTTGAAGAGAAGAAGGTTAAGGTGCTAATAGTCTTAGATGATGTGTGGAAAGAGCTTAATTTTGAGTGGATAGGACTTTCTTCTCAAGACCATCAGAAGTGTATAAAAATATTATTCACCTCACGAGATGTAAAAGTGTGCCAAAAGAATGGAAGCCAATATAATGAATCTGTCTCTATGTTGCTAGACGATGAAGCTTGGAGCCTATTTCAATATATGGCTGGAGATTTTGTAAACAAACCTGATATTCATCCAATAGCAAGAGAGGTTGCAGTGGAATGTGGTGGTTTGCCCCTTGCAATTGCGACAATTGGACGTGCACTTGGCAATGAGGAAAAGAGTACGTGGGAGGTTGCCCTTCAACAACTGAGAGACCCTCAGTCAACTCCCATCTTAGACATGGAGGAACGTGTTTATTCAAGTATTAAACTTAGCTTCAACTTTTTGGGTAGTGCAGAACACAAGTCTTGCCTTTTCCTTTGTGGATTGTTTCCAGAGGACTTTGACATTCCTGTTGAAAGTCTATTGCGTCACGGGCTGGGCTTGGGGTTGTTTAAGACAACTAATAGTGTTTGGAAAGCAAGAATGCGCATGAATTGTTTGGTGAGCGATCTAAAAGAATGTTTCTTATTATCAGACAGTAAAGAGCCAGGGTGTGTAAAGATGCATGATATTGTGCGTGACGTTGTCCTAAAAATTTATATTAGAGAAGAACTTGGTATTTTGGTGCAGAGTAATGCTGAACTGAAGGAAGTGAAACAGAAACAAGAAAAATGTCTTAGAATGTCACTTATTTTGAATGAGGAGATTGAGTTAGAAAGTGCCCTAGAATGTCCAACCCTAGAGCTTTTACAAGTGCAATCACAAAGAGAAAAGGGAGATATGACTTTATGGCGAGAGAATTTCATCCATGAAATGACTAAACTCAAAGTATTATATATTCAAAATTTGTGCATTCCAAAAACATCATCTCATTTTCATGCCTCGATCAACACCTCGGTCAACCTTCACACATTGCAACTGGAAGGATGTGATGTTGGGGATACATCTGTAATTGGTAAAGAGATCAAGAAACTAGAAATCCTAAGCTTTGCCAACTCAAACATTGAAGAACTTCCAGCTGAAATTGGGAATCTGAAATTTCTCAAATTATTGGATTTGACAGGATGTGATTATCTTAATTTTATTTCTCCTAATGTCTTAGCAAGGTTATCAAGATTGGAAGAGTTTTATTTTAGGATAAAAAATTTTCCTTGGTTGCTAAACAGAGAAGTTCTCAAAGAGTTAAGAAATCTTTATCCACAGTTGAAGGTTCTTGAGATCAAAGTAAGGAAAGTGGAAATTTTACAAGGTGATATGGATTTCAAAAACCTAGAATTTTTTTGGGTTTATATTGTTCCTTATGCTTATGAGCGTCGTGGATATTTGGAGCCAAATACAATACAATTAAGAGCTTTAGATTACAACTCTTTTAAGAGTAGTATGATGACCATGCAAATGGTCAAGAAATGTGAAATTCTCATATTGGAAAAAGTGAAGGACTTGAAAAATGTCATATCTGAATTAGATGATTGTGGACTCCAATGTGTGACAGATTTAAGGCTTGATTCATGCCCCAACCTTGAGTGTGTCATAGATTGCAATACTTCTTTGTCTGCCTTTCCATTGATCAGGTCATTGTCTTTAACAAATCTTGCCGAGATGAGGGTAATTATTTGTGCACCTGATCACCATGAAACCACAAAAGCAATTATCAAATTCTCAAATTTAGAGAAATTGGAGCTGAAGTACCTCCACAAGATGATTGGCTTTACAAACTCCAATGATTTGAACAATCGCCATCAACCAATTCATCATGGATTGAGTTCTACAACTAAGTTACCAAATTCAACAAAAACTAAGGATGGTGAAATATTATATAGATCTCGTTCAGATCCAGATGGTTGTAGATCCTCATCAGTTAGTGCCAAGTTGTTTTCATCTAATTGGATAGAACAATTTCCAAAATTGGAAATAATGGTGCTACATGGTTGTATTTCCATCGAGATGGTATTTGACTTGGAAGGATATTCAGAATTTATCGGAAATGCACAAATTTTTTTGTTTCCTTGGCTAAGAAAAGTTGAGATATCAAAGATGAATAATTTGTTATATGTTTGGGGTAATGTTCCATATTGTGTTCAGGGCTTTCATAATTTGAGACTTCTAACAATCTCAAATTGTGGCTCTTTAAAATATGTGTTTACTTCTGTCATTGTTAGAGCAATCACAAATCTTGAGGAATTGAGTGTAAGCTCTTGTGAAATGATTGAGAACATCGTGATATGGACTAGAGATGGTAAAGAGGATGACAATATCAAAGATGTGGCAACTATTGGGTTTAATAAACTATGTTCTTTATCACTTTTAAAACTTCCAAGGCTTGTGAATATCTGTTCAGATTCTGTTGAGTTAGAATATCCATCCTTGAGGGAATTTGAGATTGATGATTGTCCTATGTTGGAGATATCTTTATCACTAACCCATAACCATGCAAATCAAGAGAACCTCAACAATGTCACATATTCAGCAAATAAAGAAGATGATAACATTTGCAGTTTTAAAGGAAACAACTCAAGTTCTTCAACTTTCCCCCCTGCAGGGTGTACTCCTTTTCTGTCCAAATTCTTTCTTGAAGAAAACACAAATAAGAGAATTAATAAGGAAGTATCAATAACACGAACACCGGAGAATCATATACCTTCTAATTTTGAAAAGAAGATCAAGAAAGGAAAAAGTCATATGCCTGTTCTAGAAGACCTACACATAGTAAAATGTCGTTTGCTGGATTTTGTATTTTTTCACAATGAAAAATTCAATTTCGCAGTTCCTTCACACCTGAAAACCATCAAAATTGAAAAGTGTGTCAAGTTAAAGATCATAATGGCTAGAACAGAAAATAGAGAAGACATGACACACTCTTTTACTCAGTTAGTGTCGCTTCACTTGATAGAGCTTCCAAATCTTGTGAAGTTTAGCAGTTGTGGTCCATATGAGTTATGGAACAACCAACAAGACAAGGATGAATGTGTGGAAGGTCATGAAAGTTTCAGATGTCATCCTCTCATGGATGGGTCATTGTTTCCAAACTTAACTTCTTTGCTCATAGAAGCTTGCAACAAAATTAGCATCTTGATCTCTCATTCATCCTTGGGGAGTCTTGAGCATCTTGAAAAGCTAGAAGTACGAAATTGCAAGAAAATGCAAGAAATAGTATCACTTGAAGAAAGTTCAAATAAGATTGTGTTCAATAGGTTGAAACATCTAATTCTTGAAAACCTACCCAACCTTAAAGCCTTTTGTCTAAGTTCCTATTATTTCTTTTTCCCATCATTGCAAAAAGTGGAAATTAACGATTGTCCCAGCATGGAAGTTTTTTCACAAGGATTTAATGCTACACCTATGCTTGTGGATGTCACAATGAAGCAATCATCACTCGAAATTAGAGACTATATACAGAAGAGAGAGATCAATGATATTGTACGAGGATTTAAAGCATTTGTGGTATCACAAGGATCCAAGATGTTAAGCAGGACCATATTGCATAATGAAGGATACTTCATGAAAAAATCAAAAATAACTATCAAAGAATTTCATGAACTGTCGTTCCTTGTTCCGTTCAATAAAATACAAATGCTTCAACATGTGGAGGAACTCATTGTAAGTAAATGTGATTCTTTAGTCGAGGTGTTTGAATCAGGAGGAGAAGGTACAAGAGAAGGAGATGTCAACACAAATTATGAGCTACAAAATATGACATTGGATCATTTGCCAAAATTGAGTCACATATGGAAACACAATATTGTGAAGGTTATAAGCTTCCAGAAGCTTACCAATATTGATGTTTTATATTGCCACAGTCTGAAGAGTTTGTTCTCTTATTCCATTGCCATAAGCCTTGTGCAACTTCAAAAATTAAAAGTTCTAGATTGTGACATGATGGAGGAGATTGTTACAAAAGAAGACAGGAATACTGAAGGAGGCATCAAAGTCAAGATTTTATTTCCTAAATTGGAGGAATTGATGCTTGGATATCTTCCTAACTTGGAAAGTGTTTGTTCAGGAGATTATGACTATGATCTACCTTTGTGCATTGTTGAAGATGACATGGAATTCAATAATATTGATAAGGTTCAGATTTCATTTCCAGAATTAAAGAAATTAGTGCTTTCTCAAGTATCGAAGCTCAAGTGTTTTTGTTCAGGAGCGTACGACTACGATATCATGTTGTCATCAATTAAAGAGTGTCCAAATATGAAAACCTTTCCCCATGGAAATGTTATTGTAAACACACCCAGACTTCATAAAATAGAGTGGAATTGGGTTGATATACAAACACTTGGAGACCTAAATTTGACAATATGTAATGTTCAAAATTCAAAGAAATGCAAGGTGGAGTTGCAAAAATTAGAGACATTTAGAGATATCATTGATGAAGAGCTTCTTGGGTACATCAAAAGAGTAACAGAGCTTGACATTGTAAACTGTCACAAGCTATTGAATTGCATCCCCTCCAACATGATGCAAGTGCAACTATTCTCACATTTAAAGAAACTCATAGTGAAAGAATGTGATTGCTTAGAAGAGATATTTGAATCAAATGATAACATGTTGCAGTGTGATCTACGACACTTAAATTTGTCTTGTCTTCCAAAACTGAAGCACATTTGGAAAAATCATGGTCAAATTTTAGGATTCAAGTGTTTACAATATATATTCATCATGCAGTGCAATGATTTGGAATATGTTCTTCCGGATGTTTCCGTGGTCACAAGCCTTCCAAATTTGTTTTTGATTTATGTGTATGACTGCAAGAAGATGAAGGAGATCATTGGGAATAATTGTGTACAACAGAAAGCTAAGATTAAATTCCCATCATTATGGGAAATTTACCTAAAGAAGCTTCCTAGCCTGAAATGTTTCAGTCAAAGCTCTTTCCCTTGCTATGTTGAGATGCCAAATTGTAAGTATATAACAATTGAAGACTGCCCAGAGATGAAGACCTTTTGGTATGAAGGAATCCTATACACACCAAATTTAAGTCTTTATGGCAAATTTGACAGAGATGAAGATGTTAACGATGTGTTACAACGACACAATAAATGA 5904 0.3564 MDFCTELSKGAVSKLGELGVESTLKQFKYMIQYKKIIANLNVEHENLDSLRQSLHGWVVAENTKGNEIPRNVFKWLSDEAKIEAALQSFYENKVNKTKKCFWGQCTDLAFNYSLGKQATKKIEDITRLKEERTKLLLISYRKAAPALGSTFIEDYKRLESRNKIIQMLINKLKDDQIKRIGICGMGGVGKTTLVKELITTVENKLFDKVVVAVVSQNPDYEKIQRQIADGLGLELKGQSIEGRGWEIFQRFKEFEEKKVKVLIVLDDVWKELNFEWIGLSSQDHQKCIKILFTSRDVKVCQKNGSQYNESVSMLLDDEAWSLFQYMAGDFVNKPDIHPIAREVAVECGGLPLAIATIGRALGNEEKSTWEVALQQLRDPQSTPILDMEERVYSSIKLSFNFLGSAEHKSCLFLCGLFPEDFDIPVESLLRHGLGLGLFKTTNSVWKARMRMNCLVSDLKECFLLSDSKEPGCVKMHDIVRDVVLKIYIREELGILVQSNAELKEVKQKQEKCLRMSLILNEEIELESALECPTLELLQVQSQREKGDMTLWRENFIHEMTKLKVLYIQNLCIPKTSSHFHASINTSVNLHTLQLEGCDVGDTSVIGKEIKKLEILSFANSNIEELPAEIGNLKFLKLLDLTGCDYLNFISPNVLARLSRLEEFYFRIKNFPWLLNREVLKELRNLYPQLKVLEIKVRKVEILQGDMDFKNLEFFWVYIVPYAYERRGYLEPNTIQLRALDYNSFKSSMMTMQMVKKCEILILEKVKDLKNVISELDDCGLQCVTDLRLDSCPNLECVIDCNTSLSAFPLIRSLSLTNLAEMRVIICAPDHHETTKAIIKFSNLEKLELKYLHKMIGFTNSNDLNNRHQPIHHGLSSTTKLPNSTKTKDGEILYRSRSDPDGCRSSSVSAKLFSSNWIEQFPKLEIMVLHGCISIEMVFDLEGYSEFIGNAQIFLFPWLRKVEISKMNNLLYVWGNVPYCVQGFHNLRLLTISNCGSLKYVFTSVIVRAITNLEELSVSSCEMIENIVIWTRDGKEDDNIKDVATIGFNKLCSLSLLKLPRLVNICSDSVELEYPSLREFEIDDCPMLEISLSLTHNHANQENLNNVTYSANKEDDNICSFKGNNSSSSTFPPAGCTPFLSKFFLEENTNKRINKEVSITRTPENHIPSNFEKKIKKGKSHMPVLEDLHIVKCRLLDFVFFHNEKFNFAVPSHLKTIKIEKCVKLKIIMARTENREDMTHSFTQLVSLHLIELPNLVKFSSCGPYELWNNQQDKDECVEGHESFRCHPLMDGSLFPNLTSLLIEACNKISILISHSSLGSLEHLEKLEVRNCKKMQEIVSLEESSNKIVFNRLKHLILENLPNLKAFCLSSYYFFFPSLQKVEINDCPSMEVFSQGFNATPMLVDVTMKQSSLEIRDYIQKREINDIVRGFKAFVVSQGSKMLSRTILHNEGYFMKKSKITIKEFHELSFLVPFNKIQMLQHVEELIVSKCDSLVEVFESGGEGTREGDVNTNYELQNMTLDHLPKLSHIWKHNIVKVISFQKLTNIDVLYCHSLKSLFSYSIAISLVQLQKLKVLDCDMMEEIVTKEDRNTEGGIKVKILFPKLEELMLGYLPNLESVCSGDYDYDLPLCIVEDDMEFNNIDKVQISFPELKKLVLSQVSKLKCFCSGAYDYDIMLSSIKECPNMKTFPHGNVIVNTPRLHKIEWNWVDIQTLGDLNLTICNVQNSKKCKVELQKLETFRDIIDEELLGYIKRVTELDIVNCHKLLNCIPSNMMQVQLFSHLKKLIVKECDCLEEIFESNDNMLQCDLRHLNLSCLPKLKHIWKNHGQILGFKCLQYIFIMQCNDLEYVLPDVSVVTSLPNLFLIYVYDCKKMKEIIGNNCVQQKAKIKFPSLWEIYLKKLPSLKCFSQSSFPCYVEMPNCKYITIEDCPEMKTFWYEGILYTPNLSLYGKFDRDEDVNDVLQRHNK* 1968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3300 1967 SUPERFAMILY RNI-like 1292 1585 - -
Mal3g3300 1967 Gene3D Ribonuclease Inhibitor 511 893 IPR032675 -
Mal3g3300 1967 Pfam NB-ARC domain 163 400 IPR002182 GO:0043531
Mal3g3300 1967 PANTHER - 1633 1698 - -
Mal3g3300 1967 PANTHER - 7 1400 - -
Mal3g3300 1967 PANTHER - 1564 1629 - -
Mal3g3300 1967 Coils Coil 155 175 - -
Mal3g3300 1967 PRINTS Disease resistance protein signature 179 194 - -
Mal3g3300 1967 PRINTS Disease resistance protein signature 347 361 - -
Mal3g3300 1967 PRINTS Disease resistance protein signature 255 269 - -
Mal3g3300 1967 PRINTS Disease resistance protein signature 630 646 - -
Mal3g3300 1967 Gene3D Ribonuclease Inhibitor 910 1225 IPR032675 -
Mal3g3300 1967 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 1400 - -
Mal3g3300 1967 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1633 1698 - -
Mal3g3300 1967 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1564 1629 - -
Mal3g3300 1967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 414 IPR027417 -
Mal3g3300 1967 Gene3D Ribonuclease Inhibitor 1806 1940 IPR032675 -
Mal3g3300 1967 Gene3D Ribonuclease Inhibitor 1279 1420 IPR032675 -
Mal3g3300 1967 Gene3D Ribonuclease Inhibitor 1463 1690 IPR032675 -
Mal3g3300 1967 SUPERFAMILY RNI-like 1741 1938 - -
Mal3g3300 1967 SUPERFAMILY L domain-like 912 1112 - -
Mal3g3300 1967 Gene3D - 143 309 IPR027417 -
Mal3g3300 1967 Gene3D - 314 402 IPR042197 -
Mal3g3300 1967 SUPERFAMILY L domain-like 463 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3300 Mal-Chr3 109156616 109163683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3300 165 458 WRKY Transcription Factor Family AT5G45050 25.826 2.68e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3300 - - cam:101509145 2009.19