Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3293 ATGGCTTCAGAGAAAGAAGCTGTTCTTGCAACTACTCTCTCTGCCTCTGAATCTGATCCTCCTACCATGTTTGATAGGAGTATTATCAAAAAGGAAAATCCTTCTACTGTGTTTTATGAGGATGATGAGGTCCTTGCCTTTAGGGATATAGCTCCTGAAGCTCCTCCCCATATTATAATTATTCCGAAAGCTAGAGATGGGTTGACTGGTCTATCTAAGGCTCAAGCCCCACTGTTTTCAAGTCCAGCCGGCTTGAATAATATTACGCTCGGAGAAGAGCAACAATCAACTCAAAAAAGAAAAAGAACAAGGTTCACCCCGGGAGAAGATAAAGTTCTCATCCAAGCATGGCTAAATGTTCCCAAGAGTGCAGTTGCGGCGGCAAATCAAAGAGTAGATTCCTTTTGGTTAAGAATTAAAAATAATTACAATGAGTATCGCGGCCATTTCAAACCGAGGGGAGTGTCTCAAATAAAATCGCGATGGCATAAGTTGAATAGCATAGTTCATAAATTTGTAGGGTGCTACAAAGTAGCCTTTGAGAAAAAGAAAAGCGGTAGCTCTGAGTCTAACATCATGGGAGATGCCTATACGCTTTATTATCAAGATGAAGGTGAACAGTTCAAGTTAGAGTATGCGTGGCGATTGTTGAAAGATGAACCTAAATGGTCAAATACATCATTTGAAGGAGCTAGTAAGAGAACCAAGATTTCTGCTTCTGGAGAATACTCAACCACTTCTAATCTAGACACGCCATCAAGTTGTGAATACAACGCAGCTTCACCTACCGTGGTTTGTCCAACAGGGACAGGGGTAGAGAAAAGAAAGGAAAAATCAAAACCGGAGGAAACATCTTCTGTGGTTTGTCCAACAGGGACAGAAGTAGAGAAAGGAAAGGGAAAATCAAAATCGGAGGAAACATCTTCTGCTAATGTTGAGCTAATTGAAAAACACGAGATTCCAAAGACAAAAGTTCTTGTCATGGCAGAAATGGCACGTGTCCAAGATGAACAAAATAAGTTGAAGGAGAAAGAGTTGAATATGAAGGAGAGAGAGTTCGAGTTGGAGTTCCTCTTTAAGGATATATCCGGGATGACAGCCAGACAACAACGAGATCACGAGATGTTGTGCAATGTGATTAGAGAAAAATATGGCATTATGTAA 1164 0.4072 MASEKEAVLATTLSASESDPPTMFDRSIIKKENPSTVFYEDDEVLAFRDIAPEAPPHIIIIPKARDGLTGLSKAQAPLFSSPAGLNNITLGEEQQSTQKRKRTRFTPGEDKVLIQAWLNVPKSAVAAANQRVDSFWLRIKNNYNEYRGHFKPRGVSQIKSRWHKLNSIVHKFVGCYKVAFEKKKSGSSESNIMGDAYTLYYQDEGEQFKLEYAWRLLKDEPKWSNTSFEGASKRTKISASGEYSTTSNLDTPSSCEYNAASPTVVCPTGTGVEKRKEKSKPEETSSVVCPTGTEVEKGKGKSKSEETSSANVELIEKHEIPKTKVLVMAEMARVQDEQNKLKEKELNMKEREFELEFLFKDISGMTARQQRDHEMLCNVIREKYGIM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3293 387 PRINTS Histidine triad family signature 45 63 IPR001310 -
Mal3g3293 387 PRINTS Histidine triad family signature 24 40 IPR001310 -
Mal3g3293 387 MobiDBLite consensus disorder prediction 269 311 - -
Mal3g3293 387 MobiDBLite consensus disorder prediction 1 25 - -
Mal3g3293 387 PANTHER OS07G0575233 PROTEIN 88 356 - -
Mal3g3293 387 SUPERFAMILY HIT-like 27 64 IPR036265 -
Mal3g3293 387 Coils Coil 327 354 - -
Mal3g3293 387 Gene3D - 1 146 IPR036265 -
Mal3g3293 387 Pfam No apical meristem-associated C-terminal domain 207 370 IPR029466 -
Mal3g3293 387 MobiDBLite consensus disorder prediction 296 311 - -
Mal3g3293 387 Pfam HIT domain 30 75 IPR011146 GO:0003824
Mal3g3293 387 PANTHER - 88 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3293 Mal-Chr3 109109907 109114411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3293 79 288 Glutathione S-transferase Gene Family AT5G41240 33.182 9.20e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3293 - - mtr:MTR_7g088160 650.203