Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3285 ATGTATCATGCAAAGAAGTTTCCGGAGGCAACAATGATGCCACATAAATCTCAAGGTGGTGGTGGTGGTGGTGAACAACTTGCAAATGTTGGGGGTTTGAATGGATCTGCTGTGAAAAATGTTCAACCTACTGGAGGAGGTGGGAAACAGCGACTGCGTTGGACTTCGGATCTTCATGACCGTTTTGTGGATGCTATTACTCAGCTTGGTGGACCAGATAGAGCAACACCGAAAGGTGTTCTGAGAGTGATGGGCGTGCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAGTATCGCCTGGCGAAGTACTTGCCTGAATCACCAGGTGATGGTAAAGATTCTAAAGATGAGAAAAGGAATTCTGGAGACAGCATTTCTGGCGCTGATTCTTCCCCGGGATTGCAAATCAATGACGCACTGCGAATGCAGATGGAGGTTCAAAAACGTCTGCATGAACAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCTCAGGGTAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGTAGTACCTTGGCAGCGTCGGAAACACTTCCGTTGTCTCACGATAAGCCAAATCATCCCCTATCAGAGCCTTCGGGGTCTAGTGATGCCCTTGCAGACACTTTTTCTCCACTTAAAAAACAGAGAATTGATGAAGGTTCCAAGGATGGCTTCACTGCATCCCAAGTTACAATAAAGACTGCACAGAAGAATGATTGTAATGTTGATCGTTTGGATCCGAACTTGTATGAAGATGATGCTGGCTTCGGATTTGATTTGGAGACAGAAAATGACGACGGCAATGAGAGTGAGCAAAATTGA 852 0.4448 MYHAKKFPEATMMPHKSQGGGGGGEQLANVGGLNGSAVKNVQPTGGGGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPGDGKDSKDEKRNSGDSISGADSSPGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLAASETLPLSHDKPNHPLSEPSGSSDALADTFSPLKKQRIDEGSKDGFTASQVTIKTAQKNDCNVDRLDPNLYEDDAGFGFDLETENDDGNESEQN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3285 283 MobiDBLite consensus disorder prediction 193 283 - -
Mal3g3285 283 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Mal3g3285 283 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Mal3g3285 283 SUPERFAMILY Homeodomain-like 49 103 IPR009057 -
Mal3g3285 283 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 273 IPR044848 GO:0003700
Mal3g3285 283 Pfam MYB-CC type transfactor, LHEQLE motif 137 183 IPR025756 -
Mal3g3285 283 MobiDBLite consensus disorder prediction 109 126 - -
Mal3g3285 283 MobiDBLite consensus disorder prediction 107 138 - -
Mal3g3285 283 Gene3D - 48 107 - -
Mal3g3285 283 MobiDBLite consensus disorder prediction 1 23 - -
Mal3g3285 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 106 IPR017930 -
Mal3g3285 283 MobiDBLite consensus disorder prediction 204 218 - -
Mal3g3285 283 Coils Coil 140 160 - -
Mal3g3285 283 PANTHER OS05G0491500 PROTEIN 2 273 - -
Mal3g3285 283 MobiDBLite consensus disorder prediction 232 248 - -
Mal3g3285 283 MobiDBLite consensus disorder prediction 266 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3285 Mal-Chr3 108964367 108969077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3285 30 197 G2-like Transcription Factor Family AT3G13040 50.289 6.05e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal3g3285 Myb_DNA-binding 2.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3285 - - gmx:100783132 447.588