Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3254 ATGGATTTGTTCTTGAAGCCTGAGATTGCTCTCAAAAGGGCACATGAGCTAATCAACCTTGGGCAGAAGCAGGATGCTCTTCAGACTCTGCACGATGTTATTACTTCGAAAAGATACCGATCATGGCAGAAAATACACGAAACGATTATGTCTAAGTATGTAGAGCTGTGTGTAGACTTGCGGAAAGGACAGTTTGCGAAGGATGGGCTGATTCAGTATCGGTTCATTTGTCAACAAGTGAATGTTAGTTCTATGGAGGAGGTGGTTAAGCGTTTTATTCACCTGTCAACAGAGAAAGCTGAAAAAGCCTGTAGCCAGGCTCAGGAAATGGAACAAGCCCTCGATGTTGATGACTTAGAGGCGGATAAAAGGCCAGAGGACTTGTTGATGTGCTATGTCAGTGGGGAGAAAGGAAAGGATAGATCTGATCGGGAGCTTGTTACCCCATGGTTTAAATTCCTTTGGGAGACTTACAGGATAGTGCTTGAAATATTGCGGAACCACTCAAAATTCGAAGCCTTATATGCTATGACAGCTCATCGAGCTCTCCAGTTTTGTAAGCAGTACAAAAGAAAAACAGAATTTAGAAGGCTATGTGAAATCTTAAGAAACCATTTGGCTAATCTTAACAAACATCAGGACCAACGTAACCGACCTGATCTTTCTGCTCCTGAAAGCTTGCAATTGTATCTTGATACTAGATTTGAGCAGATGAAAATTGCCACTGAACTCGAACTCTGGCAGGAAGCCTTTAGATCTGTTGAAGATATACATGGCCTAATGTGCATGGTCAAGAAAACACCGAAACCGTCCTTGATGACGGTTTACTATGTTAAGTTGATCGAAATATTTTGGATATCTTCAAGTCATTTATATCATGCATATGCATGGTTCAAGCTCTTTTTGTTACAGAAAAGCTTCAACAAAAATCTGAGTCAGAAGGATTTGGAGCTATTAGCATCATCTGTTGTTCTAGCTGCACTTTCAGCGCCTCCTCATGATCGCAATTTAGAACTAGAGCATCAAAAGGAGCGAAATTTGAGAATGGCTAATCTCATAGGTTTTAATCTTGAAAATAAGATGAATAGCAGAGAAGTGCTCTCAAGGTCATCACTTCTTGCTGAACTGGCATCAAAGGGTGTAATGTCTTGTGTTGCACAAGAAGTGAAGGACATTTACTATCTTCTGGAACACAAATTTCTTCCCTCGGATCTTGCACTTAAAGTACTACCCTTGCTAAATAAAATTTCAAAATTAGGGGGTAAGTTTTCGTTTGCTTCATCAGTTCCAGAGGTACAATTGTCGCAGTATGTCCCAGCACTTAAAAAGTTAGCTACCCTGAGGTTGCTACAACAGGTATCTAATGTGTACCAGGCGATGAAGGTTGAGAACTTAGCTAGGATGATGCCTTTCTCTGATTTTTCCATTGTGGAAAAGATTTCTGTAGATGCTATTAAGCAGAAATTTATATCAATGAAAGTTGACCACATGAAAAAAGTTGTAATTTTCTGCAAGAAGAGTCTTGAGCCTGATGACTTATGGGATCACTTGGCCAGTTCTGCTGAACCATTGAATGAGGCAAGGGAAATGATATGTCCTCCTGATAGGAAACAATCAAAACTTGGACCCTTGCTCCCATCTTTGTTAGAGGTTGTGGCCAAAGATCACAAGATTCTCCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACAAGAACAGAAGCTTCTGCTTCATGAAATGGAACTAGAGGAGGAATCGAACAGGTTAAGACTGCAGGAAATTAATGAAGACACCGAACAAAGTCAGCCTGCAACTGTACATGAGCAGGTGAATAATCAAAGGATCCTTCAGGAAATAGCGGAAAGAGAGCATGAAGAAGCTGAGAGGCGTAGAAATGAGGAGTTGGCTTTTACTGAACAACGGCGGAAGAGACAAGAAATGGAGAAGAGACTGCAGAAACTAGGTAAAACCATGGATTTTTTGGAAAGAGCAAAGAGAGAAGAGGCTGCTCCACTTATCGAAGCGGCATACCAACAGCGCCTAGTGGAAGAGAGGATTCTTCATGCGCTTGAACAACAACGAGAGGTTGAACTGAGCAAACAGCGCCATGCTGGAGATCTCAATGAGAAGGAGCGGCTTAGTCGTATGGTGGGGAATAAAGAGAAATATCAAGAGAAGGTTGTCAATCATCGGCGAGTAGAATTGGAGGAACGTATCATGTTACAGTCCAGGAAACAGGAGAGGGAAAAAATGAGGAAGTATAAGTATTATCTTCAGTTGGAAGAAGAGAGACAATTGGAGTCTGCTCCTGCTGCACCTGCAACTTCTTCAGTCCCGACTCCAGGGAAATATATTCCCAGGTTCCGGCGAGGAGGAGCTTAA 2394 0.4173 MDLFLKPEIALKRAHELINLGQKQDALQTLHDVITSKRYRSWQKIHETIMSKYVELCVDLRKGQFAKDGLIQYRFICQQVNVSSMEEVVKRFIHLSTEKAEKACSQAQEMEQALDVDDLEADKRPEDLLMCYVSGEKGKDRSDRELVTPWFKFLWETYRIVLEILRNHSKFEALYAMTAHRALQFCKQYKRKTEFRRLCEILRNHLANLNKHQDQRNRPDLSAPESLQLYLDTRFEQMKIATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMTVYYVKLIEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLELLASSVVLAALSAPPHDRNLELEHQKERNLRMANLIGFNLENKMNSREVLSRSSLLAELASKGVMSCVAQEVKDIYYLLEHKFLPSDLALKVLPLLNKISKLGGKFSFASSVPEVQLSQYVPALKKLATLRLLQQVSNVYQAMKVENLARMMPFSDFSIVEKISVDAIKQKFISMKVDHMKKVVIFCKKSLEPDDLWDHLASSAEPLNEAREMICPPDRKQSKLGPLLPSLLEVVAKDHKILLARKSIIEKRKEEQEQEQKLLLHEMELEEESNRLRLQEINEDTEQSQPATVHEQVNNQRILQEIAEREHEEAERRRNEELAFTEQRRKRQEMEKRLQKLGKTMDFLERAKREEAAPLIEAAYQQRLVEERILHALEQQREVELSKQRHAGDLNEKERLSRMVGNKEKYQEKVVNHRRVELEERIMLQSRKQEREKMRKYKYYLQLEEERQLESAPAAPATSSVPTPGKYIPRFRRGGA* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3254 797 SMART PINT_4 436 521 IPR000717 -
Mal3g3254 797 Gene3D UVR domain 216 268 - -
Mal3g3254 797 Pfam PCI domain 368 503 IPR000717 -
Mal3g3254 797 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 436 521 - -
Mal3g3254 797 MobiDBLite consensus disorder prediction 768 797 - -
Mal3g3254 797 ProSiteProfiles PCI domain profile. 316 508 IPR000717 -
Mal3g3254 797 Coils Coil 556 592 - -
Mal3g3254 797 Gene3D - 345 506 - -
Mal3g3254 797 Gene3D - 269 344 - -
Mal3g3254 797 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 797 IPR027512 GO:0005852
Mal3g3254 797 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 632 - -
Mal3g3254 797 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 638 769 - -
Mal3g3254 797 MobiDBLite consensus disorder prediction 626 647 - -
Mal3g3254 797 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 638 769 IPR027512 GO:0005852
Mal3g3254 797 Coils Coil 614 668 - -
Mal3g3254 797 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 632 IPR027512 GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3254 Mal-Chr3 108551089 108556012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3254 1 768 Eukaryotic Initiation Factors Gene Family AT4G11420 66.047 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3254 K03254 - gmx:100803796 1101.27