Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3243 ATGGAAGATAAGATGCAACATGACCTCCCTAACAACACTCCAACCCAACATGGTTCCGAGAAAAGTGAACCGGTTAGGTCAAGATGGACACCAAAACCAGAACAAATTCTCATACTTGAGTCCATCTTCAACAGTGGCATGGTTAATCCACCAAAAGAAGAAACCATCAAAATAAGAAAACTTCTTGAAAAATTTGGCACAGTCGGTGATGCCAACGTTTTCTACTGGTTCCAAAACCGCCGGTCCAGATCTCGCCGCCGACAACGCCAGATGCAACAGGCCACACTTGATCAACAAAGAAACCAGATCATGCAACCTCATGTTGTTAATGATGGTGCAAGTGCAATTTCATGTGATATGGTTCAAACAAACCCAACTATGGGTTTTGGTGACTCTTCTGGTTCCTCTTCTTCATCATGTGGTGGTGTTCTTAGTGCTCAACAAGGCATGGATGGTTTCTTTACAGTTTCTTCTCAAACAGGTTTCCATGGAATTGATCAAAATTTAGCTGCATCTTCACTTTTGTGCCCTTCTCTTTCTCCTAATTTGAACTATCACTCTGGATATGGAATAGGGGGTGCAAGTGTTACAGGATTGATAACAGTGTTTATCAATGGGGTTGCAACAGAAATTCAAGCGGGGCCAATAGACATGAAAACAGTGTTTGGAGAAGATGCAATGTTAGTTCATTCCTCTGGTGTGCCACTTCCCACAAATGAACATGGCATCTTGATTCAGAGCTTGCACCATGGTGAAAGCTACTTTCTGGTATCAAAGTCAGCACAAGTATGA 792 0.4242 MEDKMQHDLPNNTPTQHGSEKSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIKIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMQQATLDQQRNQIMQPHVVNDGASAISCDMVQTNPTMGFGDSSGSSSSSCGGVLSAQQGMDGFFTVSSQTGFHGIDQNLAASSLLCPSLSPNLNYHSGYGIGGASVTGLITVFINGVATEIQAGPIDMKTVFGEDAMLVHSSGVPLPTNEHGILIQSLHHGESYFLVSKSAQV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3243 263 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
Mal3g3243 263 SMART HOX_1 24 91 IPR001356 GO:0003677
Mal3g3243 263 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Mal3g3243 263 MobiDBLite consensus disorder prediction 1 31 - -
Mal3g3243 263 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 260 IPR044558 GO:0003700|GO:0048830
Mal3g3243 263 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 260 - -
Mal3g3243 263 Gene3D - 24 94 - -
Mal3g3243 263 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3243 Mal-Chr3 108328630 108331682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3243 12 263 Wox Gene Family AT3G03660 50.896 7.42e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal3g3243 Homeodomain 4.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3243 - - lang:109335690 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3243 3 108328630 108331682 Mal3g3243 3 108328630 108331682 ECH
Mal3g3243 3 108328630 108331682 Mal6g4089 6 116761350 116764175 PCT