Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3230 ATGGTTTTCTGCGATCACTGCGTCGAAGACGTTCGCGCCGAGCTACACGATGATTGTTACTTAGTTTGTGTCTCTTGTGGGAAGGTGTTGGAGGATCAGTTTTTAGCTGAGGAGCCGACTTTTGTTAAAAACTCGGCCGGCCAGAGCACATTATCCGGAAATTTTGTAAACGCGGTTGAGGAGTTTGATGCCTCACGTAAAAGGACTTTAGATAGAGCTTCAAAAGAGATGGAATATTTAAGTCTCAGTCTTGGAGTAAGTGAGGGAGATATGGTCCGCCAAGCTAAAGTCTTCTATGAAATAGCACTTGCAAAAAATTTCACCCGAGGACGTAAATCAGAGCAAGTACGAGCTGCGTGTCTTTATCTTGCATTCCGGCAAAATAAAAAGCCATACTTTCTTATTGAATTTTCAAATAGTTTAAGGATAAATGTTTACGAGCTCGGAGGAGTTTTTCTGCAGCTTTGTGAAGTGTTAAGGCTTGAGAATCACCCAATTGTTAAAAAGCCTATTGAACCTTCTCTTTATCTTTATAAATATACCAGTAATTTGCTTGGCCATAGAAATGGGGTTGTCTCTGCAACTGCACTGAACATTATTGCACAAATGAACCGTGACTGGTTACAGACAGGGAGGAAACCTGGTGGATTATTTGCTGCTGCATTATACACCGCTGCTAATGCACATGGTCATAACGTCTCCAAGCGAGATATTCTAAGACTCTTCCATGTATGTGAGGCAACATTGACCAAGCGATTGGTAGAATTTGAGAATACAGACTCTTCTTTCTTGACAGTTGAGGAGTTGAATGCAATGGCAAAAGAGCATGAAAAAAATCCGGTTGTAATGCCGAACGGTAAATTCAATGGATCTACTTCAACCCCTCTAGTGTGTGAGCACAAAAAAAGCGAAGTGCCTCATTTTGCACTTGGACTATGTGAAACTTGTTACAAGGATTTTGATAAGATCTCAGGAGGATTTGGTGGTGGTTTGGACCCTCCTGCATTCCAGCGTGCTGAGAGGGAGAGAGTAAAGAAAACCATTTCTAAGGACAATGAAGATGTGGTGAAGGCATCAAATAGTGCATGCAAGGGACAGCTAGAAGATTTGCGTTCCTCTGTGCTAGAAAGGGATGACACTAGTGCGGAAGCTCAAGATGAATCAGGAAACTTCTCTGATATTGATGACCAAGAGGTTGATGCGTTCCTTTTCAATGAGGAAGAGAAGCCTTACAGGAAGATCATATGGGAAAATCAGAACCGCGAGTATCTTGAGGAGCAAGCAGCCAAGGAAGCAGCTGCAGCAGCTCAAAAGAAAATTCATGAAGCATATTTGAAAAATTGTCCAGTAGAATCAAGAGAGCTTTATGAATCTAGTACAGCTGCTGTGGCAAAATCAAAAAAGGAAAAGCAGAGACGAGCTCAAGAAGCAAAAAATTCAGGGCCTGCTAAATCTGCTGCAGAAGCCGCTTGCGAAATGGTGAAAAGAAAGGGGCTCAGTAACAAAGTCAATATGGCTAACTTTGCAAAATTATTTGAAGACAAACCAGCAGATGAGCGTAGTGCCAAGAAAGTACGATTTGATCTATCCCCTGATAATCACGATGATGAGCTGGGATCAGAGGATGATGTTGAGGATGAAGACAATGATTGGTATTATAATGAAAATATGGATGGGTCATATTTCCCTGAGGAAGATGGTTATAATTATGATGAGGATCATTACTGA 1728 0.4155 MVFCDHCVEDVRAELHDDCYLVCVSCGKVLEDQFLAEEPTFVKNSAGQSTLSGNFVNAVEEFDASRKRTLDRASKEMEYLSLSLGVSEGDMVRQAKVFYEIALAKNFTRGRKSEQVRAACLYLAFRQNKKPYFLIEFSNSLRINVYELGGVFLQLCEVLRLENHPIVKKPIEPSLYLYKYTSNLLGHRNGVVSATALNIIAQMNRDWLQTGRKPGGLFAAALYTAANAHGHNVSKRDILRLFHVCEATLTKRLVEFENTDSSFLTVEELNAMAKEHEKNPVVMPNGKFNGSTSTPLVCEHKKSEVPHFALGLCETCYKDFDKISGGFGGGLDPPAFQRAERERVKKTISKDNEDVVKASNSACKGQLEDLRSSVLERDDTSAEAQDESGNFSDIDDQEVDAFLFNEEEKPYRKIIWENQNREYLEEQAAKEAAAAAQKKIHEAYLKNCPVESRELYESSTAAVAKSKKEKQRRAQEAKNSGPAKSAAEAACEMVKRKGLSNKVNMANFAKLFEDKPADERSAKKVRFDLSPDNHDDELGSEDDVEDEDNDWYYNENMDGSYFPEEDGYNYDEDHY* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3230 575 MobiDBLite consensus disorder prediction 463 477 - -
Mal3g3230 575 Gene3D Single helix bin 369 434 - -
Mal3g3230 575 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 513 IPR029529 GO:0000126|GO:0000995|GO:0006383
Mal3g3230 575 MobiDBLite consensus disorder prediction 518 534 - -
Mal3g3230 575 Pfam Transcription factor TFIIB repeat 67 156 IPR013150 GO:0017025
Mal3g3230 575 Pfam Transcription factor TFIIB repeat 192 258 IPR013150 GO:0017025
Mal3g3230 575 SUPERFAMILY Cyclin-like 81 163 IPR036915 -
Mal3g3230 575 CDD CYCLIN 95 139 IPR013763 -
Mal3g3230 575 SUPERFAMILY Cyclin-like 171 259 IPR036915 -
Mal3g3230 575 PRINTS Transcription initiation factor IIB signature 212 228 IPR000812 GO:0006352|GO:0070897
Mal3g3230 575 PRINTS Transcription initiation factor IIB signature 118 137 IPR000812 GO:0006352|GO:0070897
Mal3g3230 575 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Mal3g3230 575 Gene3D - 172 261 - -
Mal3g3230 575 MobiDBLite consensus disorder prediction 535 553 - -
Mal3g3230 575 Pfam Brf1-like TBP-binding domain 392 513 IPR011665 -
Mal3g3230 575 MobiDBLite consensus disorder prediction 518 575 - -
Mal3g3230 575 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 513 IPR000812 GO:0006352|GO:0070897
Mal3g3230 575 Gene3D - 63 164 - -
Mal3g3230 575 MobiDBLite consensus disorder prediction 462 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3230 Mal-Chr3 108200329 108215102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3230 1 497 Inorganic Solute Cotransporters AT2G01280 40.812 1.19e-98 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3230 K15196 - gmx:100817609 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3230 3 108200329 108215102 Mal3g3230 3 108200329 108215102 ECH