Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3216 ATGGCCTATGTGTTACTGATATTGGTTACTTTGTTACTTTCTATAAATCATTCAGAGCAACTTCAATCCTCACACACTCAAACCCTTCTAAGAATTCAACAGCTATTGAATTTTCCTTCTGCATTAAGCAATTGGAACAATTCCACAGATTTTTGTAACACAGATTCAAACTCTTCACTCACTATAGTATGCTATGAAGACACAATAACTCAACTTCACATAGTAGGTGAAGGAAAATCTCAACCTCTACCTAAAAATTTCTCAATAGATTCATTTGTCACAACACTAGTAAAGCTTCCAAGTTTGAAAGTCCTCACACTGGTTTCTCTTGGTATATGGGGTCCGTTGCCGGGTAAAATAGCTCGGCTTTCGTCGTTGGAAATAGTTAACATGAGTTCGAATCATCTCTACGGTTTGATCCCTATAGAACTCTCATCACTTCCAAATCTTCAGACACTCATTCTTGATAATAACATGTTTTCTGGTCAGCTTCCTATTTGGATTGATTTGCTTTCAGCCTTAACTGTGTTGAGTTTGAAAAACAATTTGTTCAATGGTTCGTTACCAAATTCGGTTAGTAACTTGAAGAATTTGAGAATTCTTTCACTTTCTCATAATAAATTTTATGGTGTAGTACCTGATTTGAGTCACTTAAGAAATCTTCAAGTACTTGAAATGGATGAAAATGCTTTTGGACCTCAGTTTCCTAAGCTTGGTAACAAATTGGTTACTATAGTGCTAAGAGATAACATATTCAGGTCCGGTATTCCTGCTGATGTGAGCTCATATTATCAGCTCGAGCGATTCGATATCTCGTCGAATACGTTTGTAGGGCCATTCCAACCAGCATTATTGTCACTTCCTTCTATTGCTTACCTCAACATTTCTCAGAACAAATTAACCGGGATGCTTTCCGAGAATGTTTCTTGCAATTCTGAGCTTGAAGTCGTTGATTTATCGTCAAATCTTTTGACCGGGAGCTTGCCTAAAGGTTTAGTTTCAAATTCTAGTGATAGGACTGTCTTGTATGCTAGAAATTGTCTCGAGACGACGAATCAAAATCAGCAGCAGCCGCCTTTTTGCCACACTGAAGCCTTAGCTGTGGGAATATTACCTGATAAAAAGAAGAAAAAACAAGTATCAAAGGTAGTTCTTGCCCTTGGTATAGTAGGTGGAACTCTTGGAGGAGTAGCACTTGTTTTGCTGATTTTGTTTATTGTTAGAAGAGGAAATGCTAGAAGCAAAATGAAGAATCCTCCAACAAGATTAATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGATATATATCTCAAACAAAGAAGTTTGGAGCACTTGGCCTGCCAACCTATAGGAGTTTTTCATTGGAAGAGATTGAGGCAGCTACAAACAACTTTGACACAGCTTCTTTAATGGGCGAAGATTCTTATGGAGAGATGTACAGAGGTCAGTTGAAGAATGGCTCAATTGTTGTTATTAGATGTATCAAAATGAAAAAAAGATACAGCACTCAAAATTTCATGCACCACATGGAGCTTATATCGAAACTTAGGCATCGTCATTTAGTCAGCGCTCTTGGACACTGCTTTGAATGTTCTTTAGAAGATTCAAGTGTCAGCAAAATATTTCTTGTCTTTGAATATGTACCAAATGGTACACTCAGGAGCTGGACATCTGATGGGCACACTGGAAAATCTCTGAATTGGACCCAACGCATAGGAGCTGCAATTGGAGTAGCAAAGGGAATCCAATTTTTGCATACAGGAATTGTCCCTGGTGTATATTCTAACAATATCAAAATAGAAGATATTTTATTGGATCACAATCTTGTTGCAAAAATCAGCAGTTATAACTTGCCTTTGTTATCTACCATAGGAAAGGTTCGGCGTCGAAATTCTTCCGATGGATCCAAACATTCTAGTATCAATAAAAGTGGAAAGCATGAGGATAAGTGTGATATATATGACTTTGGAGTAATACTACTGGAAATCATTCTAGGAAGGACAATAAAGACAACAAATGATGCAGAAGCTTTTAAGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAGGATGCTCGGAGGAGCATTGTTGATCCAGTAATTCGCAAGGCATGCTTGGAACAATCACTGAAGACAATGACGGAGATATGTGTGAGGTGTATGATTAAAGAACCTGAAGAAAGGCCCTCCATAGAGGATGTTTTGTGGAATTTGCAGTTTGCTGCTCAGGTGCAGGATGCTTGGAGAGGGGATTCTCAAAGTAGTGAGGGGTCACCAGGTTCTCCTTTAGGACCTCAAAGAACAGCCTTCCATTAG 2337 0.3855 MAYVLLILVTLLLSINHSEQLQSSHTQTLLRIQQLLNFPSALSNWNNSTDFCNTDSNSSLTIVCYEDTITQLHIVGEGKSQPLPKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNHLYGLIPIELSSLPNLQTLILDNNMFSGQLPIWIDLLSALTVLSLKNNLFNGSLPNSVSNLKNLRILSLSHNKFYGVVPDLSHLRNLQVLEMDENAFGPQFPKLGNKLVTIVLRDNIFRSGIPADVSSYYQLERFDISSNTFVGPFQPALLSLPSIAYLNISQNKLTGMLSENVSCNSELEVVDLSSNLLTGSLPKGLVSNSSDRTVLYARNCLETTNQNQQQPPFCHTEALAVGILPDKKKKKQVSKVVLALGIVGGTLGGVALVLLILFIVRRGNARSKMKNPPTRLISENAASGYTSKLLSDARYISQTKKFGALGLPTYRSFSLEEIEAATNNFDTASLMGEDSYGEMYRGQLKNGSIVVIRCIKMKKRYSTQNFMHHMELISKLRHRHLVSALGHCFECSLEDSSVSKIFLVFEYVPNGTLRSWTSDGHTGKSLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNNIKIEDILLDHNLVAKISSYNLPLLSTIGKVRRRNSSDGSKHSSINKSGKHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKDLLQASLGADEDARRSIVDPVIRKACLEQSLKTMTEICVRCMIKEPEERPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLGPQRTAFH* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3216 778 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Mal3g3216 778 Gene3D Transferase(Phosphotransferase) domain 1 555 762 - -
Mal3g3216 778 SUPERFAMILY L domain-like 26 348 - -
Mal3g3216 778 Gene3D Phosphorylase Kinase; domain 1 436 554 - -
Mal3g3216 778 Pfam Protein tyrosine and serine/threonine kinase 476 742 IPR001245 GO:0004672|GO:0006468
Mal3g3216 778 SUPERFAMILY Protein kinase-like (PK-like) 454 747 IPR011009 -
Mal3g3216 778 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 766 - -
Mal3g3216 778 Gene3D Ribonuclease Inhibitor 241 358 IPR032675 -
Mal3g3216 778 MobiDBLite consensus disorder prediction 756 778 - -
Mal3g3216 778 ProSiteProfiles Protein kinase domain profile. 472 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3216 778 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 766 - -
Mal3g3216 778 Gene3D Ribonuclease Inhibitor 22 240 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3216 Mal-Chr3 107977605 107981516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3216 38 766 Miscellaneous Gene Families AT3G03770 63.215 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mal3g3216 PK_Tyr_Ser-Thr 4.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3216 - - gmx:100807539 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3216 3 107977605 107981516 Mal3g3216 3 107977605 107981516 ECH