Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3189 ATGGTGAACATTCACATCCACTGTTCATACACAGTGACACCTTCAGAAACAACACCAACCACCACACTTTCTTTTTCTCTATGTGATCAACTCAAGCTCCCTAATCATGGATACCAGCTTTACATCTACACAAACAAAAACCATTCATCATCATCACTCAACATTCTCATAACCTCTCTCTCCAAAACACTCACTCACTACTATCCCTTTGCAGGTAGATTAAGCTGGATCAAAGATAAAAACCATTTACAACTTCATTGCAATAACAAAGGTGCACACTTCTTAGAAGCCACGTGTGATGTTACTTTAAAAGATTTAGGTAGTTTTGATTCCACACATGTTGTCCAAAAACTTTTTCCAAAAATTAACTATGATGTTCCAATTGAAGATCTTCATTTGTTGGCTGTACAATTCACTAAGTTTCCTTGTGGTTCCCTCACTCTTGGTTTTGCTCTGTGTCGTTCTGTTCTTGATGGTTCTTCGGTTGGTAGTTTCATTAACTCATGGGCTAAACTTGCTAAAGGTGAGAGATTAGATTCTAGTTTGATTCCTTGTCTTGATAGAACTTTGTTAGATTCAAAAATCCTTCATTTACCACCACGGTTTCATCATCATGAATTTTCTCCACCGCCACTTTGGGAAAATAGTACTAATAATTTGTTACATGTGAGTAGAAAACCACTCTTTGCCACTACCATGTTGAAGTTCACCAAAAACCAAGTTGAAAAACTCAAGAACAAAGCCAACAAGAATGAAAATAACATGGAACGAGGTTATACTAGTTTTGAGGTTATTAGTGGTTACATATGGCGGTGTGTTTGTAAAGTGAGTTTTGAAGGAAATTGGAACCAACCAACAAGGTTAACAACTTTGGTTAATTGTAGAAACCGGTTGAAACCACCTTTGCCTAAGAATTATTTTGGGAATGCAACTTTTCCTACGGTGACACCAACATGTTCATTTGATGATGTTGTGAACAAACCTTTATGTTATGTGGTGGGGAGAGTGAGGGAAGCGATTGAGAAGGTGAATGATGAGCATGTAAGATCTGTTCTTGATTATGTAGCAAATCAAAAGGATATGAATTTGTTAAGGGACAAGTGTTACAACTTTGCTAAAAGAAATGGACAATTTGGTGGTGACCCGAATTTGTATGTTGTTGGTTGGACTAATTTTCCGTTTTATGAGACTGATTTTGGATGGGGGAAACCTGATTGTTTGGTTCCTGGGATTGTTAATTCTGATAGTATTGGTAAGGCTTTTGTTCTTGATGATGGAAATGGTGATGGTTTTGTCGTAACAATTTGTTTGCAACCTTTTCATATAGATGCTTTGAAGAAATTGTTTTATGAGGATATGGAGATGATCACTAGTTCCAAATTGTGA 1386 0.3672 MVNIHIHCSYTVTPSETTPTTTLSFSLCDQLKLPNHGYQLYIYTNKNHSSSSLNILITSLSKTLTHYYPFAGRLSWIKDKNHLQLHCNNKGAHFLEATCDVTLKDLGSFDSTHVVQKLFPKINYDVPIEDLHLLAVQFTKFPCGSLTLGFALCRSVLDGSSVGSFINSWAKLAKGERLDSSLIPCLDRTLLDSKILHLPPRFHHHEFSPPPLWENSTNNLLHVSRKPLFATTMLKFTKNQVEKLKNKANKNENNMERGYTSFEVISGYIWRCVCKVSFEGNWNQPTRLTTLVNCRNRLKPPLPKNYFGNATFPTVTPTCSFDDVVNKPLCYVVGRVREAIEKVNDEHVRSVLDYVANQKDMNLLRDKCYNFAKRNGQFGGDPNLYVVGWTNFPFYETDFGWGKPDCLVPGIVNSDSIGKAFVLDDGNGDGFVVTICLQPFHIDALKKLFYEDMEMITSSKL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3189 461 Gene3D - 222 452 IPR023213 -
Mal3g3189 461 Gene3D - 1 209 IPR023213 -
Mal3g3189 461 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 42 456 - -
Mal3g3189 461 Coils Coil 234 254 - -
Mal3g3189 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 42 456 - -
Mal3g3189 461 Pfam Transferase family 4 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3189 Mal-Chr3 107557599 107558984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3189 2 451 Monolignol Biosynthesis Gene Families AT5G48930 33.114 3.87e-73 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3189 K13065 - gmx:100819383 509.99