Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3182 ATGGAAATTCAATTTCAGCAACCAAACATGCAGCATCAGAAAGCAGGAATTTCAGTAACCAACAAAGGAGGAAAATTCAAAGGAAGAAACAGAAATAGCAACAACACAAACAAATTTGTTGGTGTTAGACAAAGGCCATCAGGTAGATGGGTAGCTGAGATCAAAGACACAACTCAGAAGATAAGGATGTGGCTTGGAACATTTGAGACTGCTGAGGAAGCAGCTAGAGCTTATGATGAAGCCGCGTGCCTTCTTCGAGGATCGAACACTCGAACCAATTTCATCACTCATGTCTCATTGGATTCTCCTCTTGCTTCTAGGATAAGAAATCTTCTTAATAACAGAAAAGGCGACAAAAAAAAGGAAGAGATTGTTGTTGCTTCTGCTCCAAGTAACAGCAACACTACCATTAGTAGTACTAGTACAATTACAAGCAATGATGATAACAAGGAGAGCACTCTTTCAACTTGTGCTACTCAAAATACAGAACTTTTTGAGGATGCTTATAAACCAGATTTGAGCAATTGCAAGGAAGTTTTTGAGTTAGGTTCACAATCCAATGTTTCATGTGGTTTTGGACCTTTCTTTGATCATTTTTCTTTTACTCAATTATTGGATATGGCGAAGAATGATGGCGTAACCGATACATCTAGCTTGGAGCTTTCAGAATTTGAAAGAATGAAGGTTGAAAGACAGATATCAGCTTCACTTTATGCTATTAATGGAGTGCATGAGTACATGGAAACTGTTCAAGAGTCAAATGAAGCCTTATGGGATCTTCCACCCTTGTGCTCATTATTCTGTTAA 807 0.3829 MEIQFQQPNMQHQKAGISVTNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGDKKKEEIVVASAPSNSNTTISSTSTITSNDDNKESTLSTCATQNTELFEDAYKPDLSNCKEVFELGSQSNVSCGFGPFFDHFSFTQLLDMAKNDGVTDTSSLELSEFERMKVERQISASLYAINGVHEYMETVQESNEALWDLPPLCSLFC* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3182 268 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Mal3g3182 268 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Mal3g3182 268 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Mal3g3182 268 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Mal3g3182 268 MobiDBLite consensus disorder prediction 127 152 - -
Mal3g3182 268 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 12 255 - -
Mal3g3182 268 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 255 - -
Mal3g3182 268 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Mal3g3182 268 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Mal3g3182 268 MobiDBLite consensus disorder prediction 1 37 - -
Mal3g3182 268 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Mal3g3182 268 MobiDBLite consensus disorder prediction 1 18 - -
Mal3g3182 268 CDD AP2 38 94 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3182 Mal-Chr3 107505844 107506650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3182 25 268 AP2-EREBP Transcription Factor Family AT5G19790 43.629 3.30e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g3182 AP2 5.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3182 K09286 - gmx:100796898 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3182 3 107505844 107506650 Mal3g3182 3 107505844 107506650 ECH