Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3158 ATGGAAGAACCAATTGTTGTTAACAAAGGTGAAGATCAAACACTGGATTTACCTCCAGGTTTCAGATTTCACCCTACAGATGCTGAGATAATTGTTTGTTATCTCACTGAAAAGGTTAAAAATAGCAAATTCAGTGCAACTGCTATTGGTGAAGCTGATTTGAACAAGTGTGAGCCTTGGGATTTACCAAAGAAAGCAAAGATGGGAGAGAAAGAATGGTACTTTTTTTGTCAGAAAGATAGAAAATATCCAACAGGGATGAGAACTAATAGAGCAACAGAATCTGGTTACTGGAAAGCTACAGGGAAAGATAAAGAGATTTATCACAAAGGAAAAGGAATCCAAAACCTTGTTGGTATGAAGAAGACTCTTGTGTTCTATAGAGGAAGAGCTCCTAAAGGGGAAAAAACTAATTGGGTTATGCATGAATTCAGATTGGAAGGCAAATTTGCTACTCACAATCTTCCTAACAAAGAAAAGGATGAATGGGTTGTGTCAAGGGTTTTTCACAAGAACACAGATGTGAAAAAACCACAAATTTCTGGTCTTTTAAGGATAAACTCAATTGGTCATGATGATCTTCTAGATTATTCTTCACTTCCACCTCTCATGGATCCTTCATACACAAATGATGATTTCAAAGGAATTAGTATTGCAAATCAACAAATTTCATCAACTAAATCACAATCAGATGGCTATTATCTTCCAAGCTTCTCCATCAACAATCAACAACAACACCAAATTCTAATCAAGCCAGAAGATAATTACAATAGAATTAACTATGATCATCATCATGAGATGAATCCAACCATGATCAACTACACTTCCAATTCAAACCAATCAAATCTCAACAACCCAATTGGAAACACACTCTCATCACAACCTCAAATCCGAATCCAAAATCCAAATTTGAACTACTTTATGTATCAAAATAGGATGCAAAGTTCCATGCCAACAAGTGTTTATGGCTCAGCTAAGAATAATGAGTGCAAGATGGAACAATTCTCTTCAAACCAATCACAAGATACAGGTCTCAGCAATGACACATCATCGGCGGTATCGAAACTCGACATGGAAAGGAATAGGGCATTGTATGAAGATCTTGAAGGTCCTTCATCAGTTGCACCTCTCTCAGATTTGGATAGTTTTTGGGATTATTGA 1161 0.3635 MEEPIVVNKGEDQTLDLPPGFRFHPTDAEIIVCYLTEKVKNSKFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYHKGKGIQNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFATHNLPNKEKDEWVVSRVFHKNTDVKKPQISGLLRINSIGHDDLLDYSSLPPLMDPSYTNDDFKGISIANQQISSTKSQSDGYYLPSFSINNQQQHQILIKPEDNYNRINYDHHHEMNPTMINYTSNSNQSNLNNPIGNTLSSQPQIRIQNPNLNYFMYQNRMQSSMPTSVYGSAKNNECKMEQFSSNQSQDTGLSNDTSSAVSKLDMERNRALYEDLEGPSSVAPLSDLDSFWDY* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3158 386 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 7 350 - -
Mal3g3158 386 Pfam No apical meristem (NAM) protein 18 146 IPR003441 GO:0003677|GO:0006355
Mal3g3158 386 ProSiteProfiles NAC domain profile. 17 171 IPR003441 GO:0003677|GO:0006355
Mal3g3158 386 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 350 - -
Mal3g3158 386 SUPERFAMILY NAC domain 15 172 IPR036093 GO:0003677|GO:0006355
Mal3g3158 386 Gene3D NAC domain 26 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3158 Mal-Chr3 107144987 107146626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3158 1 225 NAC Transcription Factor Family AT5G18270 66.949 1.10e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g3158 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3158 - - aprc:113861501 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3158 3 107144987 107146626 Mal3g3158 3 107144987 107146626 ECH