Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3157 ATGGGAACCCCACAGACCAATTTGCCACCAGGTTTTAGGTTCCACCCTACTGATGCAGAACTCATTCTTCACTACCTTAGGAAAAAAATTGCCTCCATTCCCTTGCCTGTTTCCATCATTGCTGAAGTTGATATTTATAAGTTGGATCCATGGGAATTACCAGCTAAGGCTTCATTTGGTGAGAAAGAATGGTACTTTTTTAGTCCAAGAGATAGAAAGTATCCAAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAAGCCACTGGAACTGATAAGACCATAGTGGCATCATTGCCATGTGGAGGAAGATCACAAGAGAACATTATTGGTGTAAAAAAGGCTCTTGTTTTCTACAAAGGAAAACCCCCAAAGGGTATTAAGACTAATTGGATCATGCATGAATATCGCCTTGTTGACAATAATAAACCTATTAAGCTCAAAGATTCCTCCATGAGGTTGGATGATTGGGTACTATGCCGAATTTACAAGAAATCAAAATGTGCACTAACTTCAACAGAATCATCAGAAACAATGGTAGGTGAAGTAGATCAAGCAGAGGAGACACAATACAAAGAAACCCTTTTTCCAATCACAAAAAATACAACCTCATCTCCTCATCAAAACACACTCATGTCTCAAAAATCAGTGTCCTTTTCCAACCTATTAGATGCTATGGACTACTCCATGTTAAGCAGCTTCTTATCTGAAAACCATTCCAACAACCCATCAGGAATTGGATCAAGTTCAGGCTTCAACACTGAAAATTTTAATCATCAACAATCCACCCAAATCAACACTAGCAACAATTACATGTCTCACAACAAGACCACTTTAAAGCACCAACTTTCAAACATAGATGAGGACATGTTATACCCATCAAAGAAGTACTTAAGTTCCTCTTGCAATTTCTCTAACATCAATTCTCAGTATGAAAACTACCTCATGAAGCAATCTTTGATGAATCAACAATTGATTTTAGGTCCTCATCATCAATATCAAGGCTAA 1017 0.3845 MGTPQTNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWELPAKASFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPCGGRSQENIIGVKKALVFYKGKPPKGIKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKCALTSTESSETMVGEVDQAEETQYKETLFPITKNTTSSPHQNTLMSQKSVSFSNLLDAMDYSMLSSFLSENHSNNPSGIGSSSGFNTENFNHQQSTQINTSNNYMSHNKTTLKHQLSNIDEDMLYPSKKYLSSSCNFSNINSQYENYLMKQSLMNQQLILGPHHQYQG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3157 338 ProSiteProfiles NAC domain profile. 8 168 IPR003441 GO:0003677|GO:0006355
Mal3g3157 338 PANTHER OS01G0104200 PROTEIN 6 296 - -
Mal3g3157 338 PANTHER NAC TRANSCRIPTION FACTOR 56 6 296 - -
Mal3g3157 338 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Mal3g3157 338 Pfam No apical meristem (NAM) protein 9 141 IPR003441 GO:0003677|GO:0006355
Mal3g3157 338 Gene3D NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3157 Mal-Chr3 107111933 107113438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3157 4 338 NAC Transcription Factor Family AT3G04070 51.558 2.83e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g3157 NAM 5.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3157 - - vun:114194335 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3157 3 107111933 107113438 Mal3g3157 3 107111933 107113438 ECH