Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3105 ATGAGTTTTCAAGATATTCAACATGGCTCCAATCCTCCTTCTCGCCGAACTCAATCACCGTCGCAAGCCGTCGCTGCTGGAATTTTTCAGATCAACACCGCCGTTGGTACTTTCCGTCGACTCGTTGATTCCGTTGGAACTGTTAAAGACACTCCAGAGCACCGTCAGAAACTGCACAATACGAGGCAGAGGATATTGCAGCTTGTGAAGGATACTTCTGCTAAGCTTAAATCTTTGTCTCAATCTAATCGTGATGCTAATGCCAATGCAAATAAGAAAATTGAAGATGCTAAGTTGGCGAGAGATTTCCAAACCACATTGCAAGAATTTCAGAAAGTTCAACAGCTTGCTTCTGAGCGCGAATCAACTTACACTCCTGCTGCCCCCACTTCTTCTCTACCAACAAGCTCTGGCCCTGGTGAAGAATCTATTGAGATAGACCCTGAAAGCCAACCTTTAATCAGAGGGCAGATCAGACAAGAGTTACATCTATTGGATAATGAAATATCCTTCAATGAGGCCATGATTGAAGAAAGAGATCAAGGTCTTAGAGAGATAGAAGAGCAAATTGGAGAAGCAAATGAAATATTCAAGGACCTTGCTGTTTTGGTTCATGATCAGGGGATTGTTATTGATGATATTCAATCGAATATAGATACTTCTGCTGGTTCAACAGCTCAAGCTAAGGTCCAGCTAGTTAAAGCTAACAAAAGTGTGAAATCCAAAAACAAATGGTGTTGGTGGGTGCTTTTGATTTTTGTGGCGGTGCTGGTCATCTTCCTCATTGTACTCCTTATTTAG 801 0.4207 MSFQDIQHGSNPPSRRTQSPSQAVAAGIFQINTAVGTFRRLVDSVGTVKDTPEHRQKLHNTRQRILQLVKDTSAKLKSLSQSNRDANANANKKIEDAKLARDFQTTLQEFQKVQQLASERESTYTPAAPTSSLPTSSGPGEESIEIDPESQPLIRGQIRQELHLLDNEISFNEAMIEERDQGLREIEEQIGEANEIFKDLAVLVHDQGIVIDDIQSNIDTSAGSTAQAKVQLVKANKSVKSKNKWCWWVLLIFVAVLVIFLIVLLI* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3105 266 Coils Coil 69 89 - -
Mal3g3105 266 PANTHER SYNTAXIN 14 265 IPR045242 -
Mal3g3105 266 SMART SynN_4 8 122 IPR006011 GO:0016020
Mal3g3105 266 MobiDBLite consensus disorder prediction 115 148 - -
Mal3g3105 266 CDD SNARE_Qa 176 234 - -
Mal3g3105 266 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Mal3g3105 266 Gene3D - 9 131 - -
Mal3g3105 266 MobiDBLite consensus disorder prediction 115 139 - -
Mal3g3105 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Mal3g3105 266 PANTHER SYNTAXIN-22-LIKE 14 265 - -
Mal3g3105 266 SUPERFAMILY t-snare proteins 19 228 IPR010989 GO:0016020|GO:0016192
Mal3g3105 266 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g3105 266 Pfam SNARE domain 210 261 IPR000727 -
Mal3g3105 266 Gene3D - 167 266 - -
Mal3g3105 266 SMART tSNARE_6 168 235 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3105 Mal-Chr3 106183928 106186228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3105 1 253 SNARE and Associated Proteins AT5G46860 57.588 5.59e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3105 - K08488 gsj:114389394 393.66