Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3096 ATGAGTCCTACAAAAGGAAAGAAGAAGCAAACAACAAGCGGCGAAACAACGACACAGGAGCAACAACAAACAGCATGGGGAGGAAGATACCTAGGAGTACGAAGAAGACCATGGGGAAGATACGCAGCAGAGATACGTGATCCTTCTACAAAAGAAAGACACTGGTTAGGAACATTCGACACTGCTGAAGAAGCTGCTTTAGCTTACGACAGAGCCGCACGTGGCATGCGTGGTTCACGTGCCAGAACCAATTTTGTTTACCATGATACCCCTCCTGGTTCTTCTGTTACTCCAATCCTCTCCCCTGATCAACCACAACAACAACAACCTCAAAGTTTTTACGATCTTTCCTTTGTTCTTCAACCTGAACCGGTTCCTATTCAACAGAACCCGGTTTTGTCTCTTGAACCGGTTTCAATTATAACTAATTACGGTTACGGTGAGGGAAATAATAATAATAATAAATATAGTCTTCCTCATCAAATTCCTCTTGACACATATAATATTAATACTAATGGAAATTCCTATTTTAACCTTAGCAATACTAGTAGCATTAACAACGACAGCGTTGAGCTTCCTCCATTGCCACCGGATATTACGAGCTCCGCGTGTTATAGTCAGGGTGATTCAGTATTCAACGAAGGTGGTGACAATGGATATTATTATTCATCATGGGAGCAGAATGTAGGAGTGGATTGTTACAATAATCAAATGTTGGGTACAAATATGGGAGGTGCAGAGAATAATAATAATAATATTATGGCAGGTTCTGTTAATGGTACTTTTGATTTTGGAAGCTCTTCATTTTTCTACTAA 816 0.402 MSPTKGKKKQTTSGETTTQEQQQTAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARGMRGSRARTNFVYHDTPPGSSVTPILSPDQPQQQQPQSFYDLSFVLQPEPVPIQQNPVLSLEPVSIITNYGYGEGNNNNNKYSLPHQIPLDTYNINTNGNSYFNLSNTSSINNDSVELPPLPPDITSSACYSQGDSVFNEGGDNGYYYSSWEQNVGVDCYNNQMLGTNMGGAENNNNNIMAGSVNGTFDFGSSSFFY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3096 271 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Mal3g3096 271 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Mal3g3096 271 MobiDBLite consensus disorder prediction 1 26 - -
Mal3g3096 271 CDD AP2 29 85 IPR001471 GO:0003700|GO:0006355
Mal3g3096 271 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 271 - -
Mal3g3096 271 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Mal3g3096 271 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 7 271 - -
Mal3g3096 271 SUPERFAMILY DNA-binding domain 29 86 IPR016177 GO:0003677
Mal3g3096 271 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Mal3g3096 271 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Mal3g3096 271 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Mal3g3096 271 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3096 Mal-Chr3 106086320 106087135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3096 11 207 AP2-EREBP Transcription Factor Family AT5G13910 47.980 1.69e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g3096 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3096 K09286 - gmx:100792421 188.348