Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3090 ATGGGTCATCATTTTCTCCTTCTCTGTCTTCTCTTTCACCCTTTTGTTCTCTTCTTCACTACCCATCACGCAAATGCCTTCAATTCGTCGATTCCCAACGATGCATTGTCCCTTCTCACCTTCAAACGCTTCGTCTCTTCCGACCCTTCAAATCTTCTCTCCGGTTGGACTCACCGTTCATCTTTCAAATTTTGCAACTGGCACGGCGTTACTTGCGGCGGTGGAGACGGCAGAGTGACTGAACTTAATGTTACCGGTCTTCGCGGCGGTGAATTGGTGTCTGACATTGGAGATTTGTCTGAGCTTCGAGTTTTGTCTCTTCCCGGAAACATGTTCTCCGGCGAGATTCCGGTGAGTTTGGTGAATCTCCGGGAACTTGAGGTTCTTGAGCTTCAAGGAAATAACTTTTCAGGGAAAGTGCCTTTTCAGATGAGTTCTTTTGAATCAGTTTTCCTTGTTAATCTCTCTGGTAATTCTTTTTCTGGTGAAATTCCACATGGGTTGGTTTTTTCTAGGAATGTGGAAATTGTTGATTTGTCTGATAATCAATTTTCTGGTTCTATTCCTTTGAATGATTCTAGTAGTTGTGAATCTTGGAAGCATTTGAAACTGTCTGATAATTTTTTGACTGGTGAGATTCCACACCAAATTGGGAAATGTAGAAACTTGAAGACCCTTTTGGTTGATGGGAATATTTTGGAAGGTGAAATTCCTCATGAGATTGGGAATGTTGATGAACTTGGAGTTCTTGATGTTTCTAGAAACAGCCTCACCGGAAGGATCCCTAAAGAGCTAGGTAATTGTTTGAAATTGTCTGTGCTTGTGCTTACTGATTTGTATGAGGATCGCGGCGGTACAAATGAGGGAAGCTTGGAGGAGGATAGTAGGTTTAGAGGTGAATTTAATGCTTTTGTTGGGAATATTCCTTATGAAGTGTTGTTGCTTTCGAGTTTGCGGGTTTTGTGGGCGCCTCGAGCGAATCTCGGTGGACGGTTGCCTGCTACTGGTTGGACAGATTCATGCTCTCTGAGAGTACTCAATTTGGCTGAGAATTATTTTACTGGTGTTGTGCCTGAGAGTTTGGGGATGTGTGGGAATCTAACTTTCTTGGACTTGAGTTCTAACAATTTAGTGGGATATCTGCCTTTGCAGCATCTTCAGGTTCCTTGTATGACTTATTTCAATGTAAGCAGGAATAATATATCTGGTGTGCTTCCGGAATTTCGGAAAGAAATGTGTCAATCGAGAAGCGCCCTTGCTGCACTAGAACCTGCATTGCTTGAATTGGAAGGTCTGAATGATGCGTATTTTAAAATTCCTATTTTGAGATTTCAAGAGAATGCTTTCATTGAATCAGGTTTCAAAGAGATTATTGTTGTTAGCCATGATTTCAGCTCGAACGGTTTTGTGGGGCCCTTACCGTTGTTCTTTGTTGGAGATAATCTTTTTACTGAAAATCGTAACGTAACATACATGTTGTCTCTCAATAATAATAAATTCAATGGAACACTTCCATACCGGCTAGTTTCAAACTGTAATGAACTCACGACATTTTCGGTTAACCTGAGTGTGAACCAACTATCTGGTGAGATTTCCCAACCATTGTTTCTGGACTGCCTGCAGTTGACGGATTTTGAAGCAGCATACAATCAATTTGATGGATCAATTGGACCTGGTATAGGTGACTTGGTGTTGCTTCGGCGTCTCGATTTGAGTGCTAACAAACTATCTGCAACACTGCCGAATCAGTTGGAAAACCTAAAAAACATGAAATGGATGCTTCTAGGAGGAAACAACCTGACAGGGCAAATTCCTTACCAACTTGGTAGATTGACTTCCCTTGTTGTTTTGAATGTATCTCACAATGCTCTAATTGGAACAATTCCACCAAGTTTGTCGAACGCCACAAGTCTTGAAATTCTGTTGCTAGATCACAACAACCTTTCTGGAGAAATACCTTTATCTGTTTCTGCTCTTTCCAATCTTGTTCAACTAGATGTTTCATTCAACAATCTTTCTGGTCATATTCCCCGTCTCCAACACCCGAGTGATTGTGATTCATATATAGGGAATAAACACCTGCACTCTTGCCCCGATCCATACTTTGACTCACCTCCTGTTTCTCAACCAGCTCCTCTTGCAGTCAAGAATTCACATCGTCGCAGATGGAGGAAAGTAAGGACTGTGGTTATCACGGTGTCCGCTTCTGCTTTTCTGGGTCTATGCACACTTTTGGGAATAGTGTTGGTGATTTGTTTTAGAAAGAGTAAACTTGGTCGGCTAAGCAGCATTAGAAGGCGAGAAGTGGTGACCTTTCAAGTTGTTCCAATAGAATTGAGTTACGACAATGTGGTCACAGCTGCCGGAAATTTCAGCATCCGGTATCTAATCGGCACAGGTGGCTTTGGATCAACTTACAAAGCAGAGCTATCACCGGGTTTTCTTGTTGCCATAAAGAGGCTTTCGATTGGTAGATTTCAAGGCATGCAACAGTTTGAAACCGAAATAAGGACGCTTGGGAGAATTCGACACAAGAATCTTGTGACTCTAATTGGCTATTACGTAGGAAAAGCTGAAATGTTGTTAATTTACAATTACCTCTCTGGTGGAAACCTTGAAGTTTTCATACATGATAGGTCAGGGAAGAATGTGCAGTGGCCGGTTATTTACAAAATAGCAAAAGACATCGCTGAGGCCCTTGCTTACCTTCATTACTCATGTGTTCCTCGCATAGTTCACCGAGATATCAAGCCCAGCAACATTTTACTTGACGAAAATCTTAATGCGTACCTGTCCGATTTTGGCTTGGCACGGCTGCTTGAGGTATCCGAGACTCATGCCACTACTGATGTGGCGGGCACATTTGGTTATGTTGCGCCTGAATACGCCACCACTTGTAGGGTTTCTGATAAATCTGATGTTTACAGTTATGGTGTTGTATTATTAGAATTGATATCAGGAAGAAGGTCACTTGATCCATCGTTTTCTGATTATGGAAATGGATTCAATATAGTACCGTGGGCTGAGCTGCTAATGACCGAAGGTCGTTGTTCGGAGCTGTTTTCATCGGCTTTGTGGGAAGCAGGACCTCAGGAAAAGTTGCTAGGGCTTTTAAAGATTGCATTAACTTGCACAGAAGAGACTCTTTCTATTCGACCGTCCATGAAGCATGTTCTTGACAAATTGAAACAGTTGAAAAGTTGA 3204 0.4207 MGHHFLLLCLLFHPFVLFFTTHHANAFNSSIPNDALSLLTFKRFVSSDPSNLLSGWTHRSSFKFCNWHGVTCGGGDGRVTELNVTGLRGGELVSDIGDLSELRVLSLPGNMFSGEIPVSLVNLRELEVLELQGNNFSGKVPFQMSSFESVFLVNLSGNSFSGEIPHGLVFSRNVEIVDLSDNQFSGSIPLNDSSSCESWKHLKLSDNFLTGEIPHQIGKCRNLKTLLVDGNILEGEIPHEIGNVDELGVLDVSRNSLTGRIPKELGNCLKLSVLVLTDLYEDRGGTNEGSLEEDSRFRGEFNAFVGNIPYEVLLLSSLRVLWAPRANLGGRLPATGWTDSCSLRVLNLAENYFTGVVPESLGMCGNLTFLDLSSNNLVGYLPLQHLQVPCMTYFNVSRNNISGVLPEFRKEMCQSRSALAALEPALLELEGLNDAYFKIPILRFQENAFIESGFKEIIVVSHDFSSNGFVGPLPLFFVGDNLFTENRNVTYMLSLNNNKFNGTLPYRLVSNCNELTTFSVNLSVNQLSGEISQPLFLDCLQLTDFEAAYNQFDGSIGPGIGDLVLLRRLDLSANKLSATLPNQLENLKNMKWMLLGGNNLTGQIPYQLGRLTSLVVLNVSHNALIGTIPPSLSNATSLEILLLDHNNLSGEIPLSVSALSNLVQLDVSFNNLSGHIPRLQHPSDCDSYIGNKHLHSCPDPYFDSPPVSQPAPLAVKNSHRRRWRKVRTVVITVSASAFLGLCTLLGIVLVICFRKSKLGRLSSIRRREVVTFQVVPIELSYDNVVTAAGNFSIRYLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGMQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMLLIYNYLSGGNLEVFIHDRSGKNVQWPVIYKIAKDIAEALAYLHYSCVPRIVHRDIKPSNILLDENLNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKSDVYSYGVVLLELISGRRSLDPSFSDYGNGFNIVPWAELLMTEGRCSELFSSALWEAGPQEKLLGLLKIALTCTEETLSIRPSMKHVLDKLKQLKS* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3090 1067 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1066 - -
Mal3g3090 1067 Gene3D Phosphorylase Kinase; domain 1 754 866 - -
Mal3g3090 1067 Pfam Leucine rich repeat 566 624 IPR001611 GO:0005515
Mal3g3090 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 911 923 IPR008271 GO:0004672|GO:0006468
Mal3g3090 1067 Gene3D Ribonuclease Inhibitor 29 89 IPR032675 -
Mal3g3090 1067 Gene3D Ribonuclease Inhibitor 463 612 IPR032675 -
Mal3g3090 1067 SMART LRR_typ_2 123 147 IPR003591 -
Mal3g3090 1067 SMART LRR_typ_2 611 635 IPR003591 -
Mal3g3090 1067 SMART LRR_typ_2 563 587 IPR003591 -
Mal3g3090 1067 SMART LRR_typ_2 244 268 IPR003591 -
Mal3g3090 1067 SMART LRR_typ_2 659 681 IPR003591 -
Mal3g3090 1067 ProSiteProfiles Protein kinase domain profile. 791 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3090 1067 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 13 1066 - -
Mal3g3090 1067 SUPERFAMILY L domain-like 305 683 - -
Mal3g3090 1067 SUPERFAMILY RNI-like 85 407 - -
Mal3g3090 1067 CDD STKc_IRAK 797 1065 - -
Mal3g3090 1067 ProSiteProfiles Leucine-rich repeat profile. 366 387 IPR001611 GO:0005515
Mal3g3090 1067 Gene3D Ribonuclease Inhibitor 290 427 IPR032675 -
Mal3g3090 1067 Gene3D Ribonuclease Inhibitor 90 280 IPR032675 -
Mal3g3090 1067 Gene3D Ribonuclease Inhibitor 613 704 IPR032675 -
Mal3g3090 1067 SUPERFAMILY Protein kinase-like (PK-like) 769 1062 IPR011009 -
Mal3g3090 1067 Pfam Protein kinase domain 796 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3090 1067 ProSitePatterns Protein kinases ATP-binding region signature. 797 819 IPR017441 GO:0005524
Mal3g3090 1067 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Mal3g3090 1067 SMART serkin_6 791 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3090 1067 Gene3D Transferase(Phosphotransferase) domain 1 867 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3090 Mal-Chr3 105934094 105937297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3090 10 1066 Receptor kinase-like Gene Family AT3G02130 42.770 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Mal3g3090 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3090 - - cam:101512699 1761.12