Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3081 ATGGTTGCGCAATCGTTGGAGATTCGCGATTCCGTTGCGAATGATTGTGGTGGTGTCGTTCCTAAGCTGAAAATCAAGGTGAAATACGGTGGAAATAAGCTGAAAGCTGAATCGAAGGATGTGACGATGACGCCAATGTCGTCGCAGAGGAGATCGAGTTCGAGGATTCAAGCTAAGCAGAAAGAGGTTGAAGAGATTCAGCGTCGTCGGAAAGCTGAGGTGGTAGAGAAATCCGGCGAGGTTGAGGTTTCACCGGCGAAGTCGAAAAAGCGTGTGAGGAGAAGTCCTAGCAAGGAGAGTGTGGTTAAGGAGGTGGTTGTTGAGGAGAAAGAGATGACGGAGGAGAAGAAGGAAGAGGTTGTTGTTGAGGGGAAACCGACGAAGAAGAAGAAATCGGCGTCGGATGAGAAACGTGAGCTGATGGAGGTTTGGAATGAGAAAATAACGGTGGAAACTGAAAATGCTAGTGGTGCATTGGGTGATAAGAGCTTAACGGCCAAGGTGAAAGAGACTATTAGGGTGTTTAACAAACACTATCTTCATTTGGTTCAGGATGAGGAGGAGAGGGTTGCTAAAGCGAAAGCTGAAGCTGAGAAGAAAGGTGGTGGGAAGAAATCTGCTGCTGATAAGAAAGCTGCTAAAAAGAAATCACCTGAGAAGAAATCTCCTAAAAAATCTCCTGGGAAGAAGTCCCCTAAGAAAGATGCAGAACCTAAAGAAACAAAGCAAAAAGCCAGGCGACCTGATCTGAAAGCCATAACTAAGATGATGAAGAATAATGAGATACTGTACCCCGAGAAAAGAATTGGCACCGTTCCAGGTATTGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCACTGGTTAAATGGCATTGATTATGTGGGACAAACTTATTCCAAAGTGTACCCCGACTACAAACTCCCAGTTGCTGTGGCCATTGTTATTTCAGGCATGTATGAGGATGATCTGGATAATGCGGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTAATAAGCGTCAAATGGGAGATCAAAAAATGGAGCGGGGTAATTTAGCACTCAAGAACTGCAAGGAGAATGGTGTGCCAGTACGGGTGATTCGTGGTCATGACTCTAAAAGCAGTTACACTCGTAAAGTCTACACATACGACGGCTTGTACAATGTTAACGATTATTGGGCAGAGAAGGGAATATCTGGCTTCACAGTCTACAAGTTTCGGCTTAGGAGGGTTGAGGGACAGCCTATGTTAACCACAAATCAGGTTTATTTCACTTGTGGACGTGTGCCTGAGACTGTTGCAGAAATACGAGGGTTGGTATGTGAGGATATCACTGGAGGTCAGGAAGATGTGCCCATACCAGTTACAAATTTGGTTGATGACTCCCCTGTTCCACCCACAGGTTTCTCATATCGCAAGCTTCTGAAGGTTGCAAAAAGTGTTAAGCTTCCTGCAAATGCCCCTGGATGCAAATGCAAAGGCAAGTGTATTGATCCAACAATCTGTGAATGTGCAAAGCGCAATGGCTCCGAATTTCCCTATGTGTCTAAAGATGGTGGCAGATTAATTGAAGCTAAAGATGTTGTGTTTGAATGTGGTCCCAATTGTGGTTGTGGTCCTGAGTGTGTCAATCGAACTTCTCAAAAAGGACTTCCATATCGTCTGGAGGTTTTCCGCACTGCAAAGAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGTGCACCAGTTTGTGAGTACATAGGAATACTTGCTAGGGCAGAAGACATGGACAGTGTATTGGAAAACAACTATATTTTTGAGATAGATTGCTTGCAAACAATCAAGGGACTTGGTGGAAGAGAGAGGCGGTCACAAAATGTAGCATATGCTGCAAATCTGTTGGGTAAATATGACGACAAAGGTTCTGAAAATGCACCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATTTGTTTGTACAATGTGTCTTGAACACACACCATGATTTGAGACTGGCTCGAGTGGTGCTGTTTGCTGCAGACAACATACCTCCTTTACAGGAGCTGACATATGACTATGGCTATGCGCTTGATAGCGTCTTGGACTCTGATGGGAAGATAAAGCAAATGGCGTGCTATTGTGGAGCTTCAGGGTGCAGGAAGCGTTTATTCTAA 2238 0.4437 MVAQSLEIRDSVANDCGGVVPKLKIKVKYGGNKLKAESKDVTMTPMSSQRRSSSRIQAKQKEVEEIQRRRKAEVVEKSGEVEVSPAKSKKRVRRSPSKESVVKEVVVEEKEMTEEKKEEVVVEGKPTKKKKSASDEKRELMEVWNEKITVETENASGALGDKSLTAKVKETIRVFNKHYLHLVQDEEERVAKAKAEAEKKGGGKKSAADKKAAKKKSPEKKSPKKSPGKKSPKKDAEPKETKQKARRPDLKAITKMMKNNEILYPEKRIGTVPGIEVGYQFYSRAEMVAVGFHSHWLNGIDYVGQTYSKVYPDYKLPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGNKRQMGDQKMERGNLALKNCKENGVPVRVIRGHDSKSSYTRKVYTYDGLYNVNDYWAEKGISGFTVYKFRLRRVEGQPMLTTNQVYFTCGRVPETVAEIRGLVCEDITGGQEDVPIPVTNLVDDSPVPPTGFSYRKLLKVAKSVKLPANAPGCKCKGKCIDPTICECAKRNGSEFPYVSKDGGRLIEAKDVVFECGPNCGCGPECVNRTSQKGLPYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYIGILARAEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQNVAYAANLLGKYDDKGSENAPEFCIDAGSTGNIARFINHCCEPNLFVQCVLNTHHDLRLARVVLFAADNIPPLQELTYDYGYALDSVLDSDGKIKQMACYCGASGCRKRLF* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3081 745 SMART set_7 566 721 IPR001214 GO:0005515
Mal3g3081 745 Pfam SAD/SRA domain 269 427 IPR003105 -
Mal3g3081 745 MobiDBLite consensus disorder prediction 229 252 - -
Mal3g3081 745 ProSiteProfiles Post-SET domain profile. 729 745 IPR003616 -
Mal3g3081 745 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 46 745 IPR025794 GO:0016571
Mal3g3081 745 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 49 744 - -
Mal3g3081 745 SMART G9a_1 265 427 IPR003105 -
Mal3g3081 745 Gene3D - 252 439 IPR036987 -
Mal3g3081 745 ProSiteProfiles Pre-SET domain profile. 501 563 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g3081 745 MobiDBLite consensus disorder prediction 113 138 - -
Mal3g3081 745 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 49 744 - -
Mal3g3081 745 SMART preset_2 454 550 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g3081 745 ProSiteProfiles YDG domain profile. 270 423 IPR003105 -
Mal3g3081 745 SUPERFAMILY PUA domain-like 252 442 IPR015947 -
Mal3g3081 745 MobiDBLite consensus disorder prediction 193 216 - -
Mal3g3081 745 Gene3D SET domain 447 745 IPR046341 -
Mal3g3081 745 ProSiteProfiles SET domain profile. 566 715 IPR001214 GO:0005515
Mal3g3081 745 SUPERFAMILY SET domain 451 721 IPR046341 -
Mal3g3081 745 MobiDBLite consensus disorder prediction 38 101 - -
Mal3g3081 745 MobiDBLite consensus disorder prediction 193 252 - -
Mal3g3081 745 Coils Coil 176 196 - -
Mal3g3081 745 MobiDBLite consensus disorder prediction 55 101 - -
Mal3g3081 745 Coils Coil 49 76 - -
Mal3g3081 745 Pfam SET domain 577 715 IPR001214 GO:0005515
Mal3g3081 745 Pfam Pre-SET motif 458 558 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3081 Mal-Chr3 105780292 105788745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3081 256 745 EF-hand Containing Proteins AT5G13960 67.617 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal3g3081 SAD_SRA 1.1e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3081 K11420 - gmx:100796701 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3081 3 105780292 105788745 Mal3g3081 3 105780292 105788745 ECH