Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3080 ATGGCTCCCTCAAAATCAAAAGTAAAACATGTGCTGTTCCTATGTTTCTATCTCCTCCGCATGGCCATTGCAGACGATGGCACTTTCATGTCAAAGCTAGCAAAATCTCTGAGTCCTACTCCGTCAGGTTGGTCAACAAGCAGCAACTTCTGCACCTGGAACGGTGTAAAATGTGACGAAACAAACCGTGTAACATCTATCGACCTTACTTCCAAGTCACTCAATGGAACCCTTCCTTCCGATCTCAACTCACTATCCCAACTCACCTCCCTCTTTCTTCAGTCCAACTCCCTCTCCGGCGCATTACCCTCACTCGCCAACCTCGCCTTGCTCGAAACGGTTTTCCTCGGCTCCAACAACTTCTTATCTGTTCCTGTTGGTTGCTTCCAAGGACTCACCAGCCTCCACACCCTCTCCATGGGCAGCAACACTGATCTCGCTCCATGGACGTTTCCCACAGACTTGTCTCAGTCTTCCAGCCTAGTCTCACTCGACCTCAGACATACCAATCTCGTGGGTTCCCTGCCGGATATATTTGATTCTTTAGTCAGTTTGCAGGAGCTTCGGCTCTCGTATAACAATCTCACAGGGGATTTGCCCAAGTCTTTCTCAGGATCTGGGATTAAAAACATATGGCTCAACAATCAAAATGATATGTTTGGGTTTACAGGTTCTATTGAAGTGCTTGCTTCAATGACTCACTTGACTCAAGTTTGGCTTATGAAGAACAAATTCACCGGTCAAATTCCTGATTTGTCCAATTGTACCAGTTTATTTGATCTACAGCTTCGGGATAATAAGTTAACAGGTGTTGTTCCGCCTTCTTTAATGGTTATGTCTAGCTTGCAGAATGTTACCTTGGAAAACAATCAATTGCAGGGCCCTTTTCCTTCTTTTGGGAATGGTGTACGGTTCAGTGATCTTGATGAAAATAATAGCTTCTGCCGAAACACTTCTGGACCTTGTGATCCACGGGTCACTACTTTGCTCGATGTTGCTGCAGATTTTAGATATCCCCTTAAACTAGCCAATTCTTGGAAAGGGAACAATCCTTGTCATCAAAACTGGAGCTTCGTAGTGTGTTCAGGGGAAAAGATTATTACAGTGCACTTAGCGAAACAGAATTTGAATGGAACCATTTCACCTGCATTTGCAAATTTAACTGATTTGAGGAACTTGTATTTGGGTGATAACAATTTGACTGGTTCAATACCTGAGAGCTTGACAAGTTTGGCACATCTTCAGATTCTGGATGTATCTAACAACAATCTATCTGGAGAGGTTCCTAAATTCTCATCTATGCTGAGATTCAATTCAACGGGTAATGTTTTGCTTGGACTTGGAAGTCCATCTGAAAAGGCAACTGCTTCTTCACTGTCTCTGGCTTGGATTCTAGGAGCAACATTGGTTGGTGTAGGAGCTGTACTATTTATTGTGATGATTGTTTGTAAACGTAAAGGATATCTAAGCTTAGTACAGACTAGGATCTTCAAGAAAACAAGAATATCTGTTGACCACAATATTGAAGATTTCATAAAAAGATATAATTTGTCAGTGCCAAAGCGGTATAGTTATGCAGAAGTGAAAAGGTTCACAAACTCATTTCGAGATAAGTTGGGTCAAGGAGGATATGGTGTTGTGTACAAAGCCAATTTACCCGATGGTCGTCATGTAGCGGTGAAAGTAATAAGCGAGTGCAAGGGAAATGGAGAAGAATTTATAAATGAAGTTGCAAGCATAAGTAAAACATCACATGTCAACATTGTCTCACTTTTGGGCTTTTGTTATGAGAAGAACAAAAGTGCATTGATATATGAATTCATGTCCAATGGATCATTAGATAAGTTCATATATAGAAGTGGATTTCCAAATGCTATTTGTGATTTGGATTGGAACACATTGTTCCAAATTGTAATTAGCATTGCTCGAGGACTAGAGTACTTACATCAAGGTTGTATTTCAAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTAGATGAAGATTTTTGTCCAAAAATATCTGATTTTGGTCTAGCTAAAATATGTCAAAAGAAAGAGAGTATCGTGTCCATACTTGGCACAAGAGGAACTATAGGTTACATAGCACCAGAAGTATTTAGTCGAGCATTTGGTGGAGTTTCTTCCAAGTCTGATGTATATAGTTATGGCATGTTGATTCTTGAAATGATCGGAGGAAGAAAGAATCATGACACTAGAGGGTCTCATACGAGCGAAATGTACTTTCCGGATTGGATATATAAGGATCTTGAGCAAGGTAAGACTCTTTTAAATAGTTCGACAATCACTGAAGAAGTAAATTATATGGTAAAGAAGATTACTATGGTGAGTCTCTGGTGCATTCAAACGAATCCATTAGACAGACCATCAATGAATAAAGTAATAGAAATGCTACTAGGACCACTTCATTCAATACCATATCCTCCAAAGCCCGTTTTATTTTCTCAGGAAGGGATGTCTTTACAAATGTCTGAAATGTCTTCCTCTAATTTATACGACTCAAATTCAATTATAATAGGGAGAGAATCAAACGTGTTTAACACAAACGAAAATGTTATGCAATTGTAA 2595 0.3969 MAPSKSKVKHVLFLCFYLLRMAIADDGTFMSKLAKSLSPTPSGWSTSSNFCTWNGVKCDETNRVTSIDLTSKSLNGTLPSDLNSLSQLTSLFLQSNSLSGALPSLANLALLETVFLGSNNFLSVPVGCFQGLTSLHTLSMGSNTDLAPWTFPTDLSQSSSLVSLDLRHTNLVGSLPDIFDSLVSLQELRLSYNNLTGDLPKSFSGSGIKNIWLNNQNDMFGFTGSIEVLASMTHLTQVWLMKNKFTGQIPDLSNCTSLFDLQLRDNKLTGVVPPSLMVMSSLQNVTLENNQLQGPFPSFGNGVRFSDLDENNSFCRNTSGPCDPRVTTLLDVAADFRYPLKLANSWKGNNPCHQNWSFVVCSGEKIITVHLAKQNLNGTISPAFANLTDLRNLYLGDNNLTGSIPESLTSLAHLQILDVSNNNLSGEVPKFSSMLRFNSTGNVLLGLGSPSEKATASSLSLAWILGATLVGVGAVLFIVMIVCKRKGYLSLVQTRIFKKTRISVDHNIEDFIKRYNLSVPKRYSYAEVKRFTNSFRDKLGQGGYGVVYKANLPDGRHVAVKVISECKGNGEEFINEVASISKTSHVNIVSLLGFCYEKNKSALIYEFMSNGSLDKFIYRSGFPNAICDLDWNTLFQIVISIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQKKESIVSILGTRGTIGYIAPEVFSRAFGGVSSKSDVYSYGMLILEMIGGRKNHDTRGSHTSEMYFPDWIYKDLEQGKTLLNSSTITEEVNYMVKKITMVSLWCIQTNPLDRPSMNKVIEMLLGPLHSIPYPPKPVLFSQEGMSLQMSEMSSSNLYDSNSIIIGRESNVFNTNENVMQL* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3080 864 Pfam Protein kinase domain 537 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3080 864 PANTHER RECEPTOR-LIKE KINASE TMK4 10 808 - -
Mal3g3080 864 SUPERFAMILY L domain-like 326 434 - -
Mal3g3080 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Mal3g3080 864 SMART LRR_typ_2 411 433 IPR003591 -
Mal3g3080 864 SMART LRR_typ_2 387 410 IPR003591 -
Mal3g3080 864 SMART LRR_typ_2 85 107 IPR003591 -
Mal3g3080 864 SMART LRR_typ_2 182 205 IPR003591 -
Mal3g3080 864 SMART LRR_typ_2 108 131 IPR003591 -
Mal3g3080 864 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Mal3g3080 864 SUPERFAMILY L domain-like 31 309 - -
Mal3g3080 864 Gene3D Ribonuclease Inhibitor 28 322 IPR032675 -
Mal3g3080 864 SUPERFAMILY Protein kinase-like (PK-like) 513 807 IPR011009 -
Mal3g3080 864 Gene3D Ribonuclease Inhibitor 324 447 IPR032675 -
Mal3g3080 864 Gene3D Phosphorylase Kinase; domain 1 506 607 - -
Mal3g3080 864 PANTHER OSJNBA0070M12.3 PROTEIN 10 808 - -
Mal3g3080 864 Pfam Leucine rich repeat N-terminal domain 327 362 IPR013210 -
Mal3g3080 864 Pfam Leucine rich repeat N-terminal domain 28 59 IPR013210 -
Mal3g3080 864 Pfam Leucine rich repeat 369 424 IPR001611 GO:0005515
Mal3g3080 864 Gene3D Transferase(Phosphotransferase) domain 1 608 813 - -
Mal3g3080 864 SMART serkin_6 533 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3080 864 ProSiteProfiles Protein kinase domain profile. 533 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3080 Mal-Chr3 105761095 105770159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3080 505 826 Receptor kinase-like Gene Family AT5G38280 58.589 1.80e-126 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal3g3080 Pkinase 8.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3080 - - cam:101489592 968.378