Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3075 ATGTCCATCTTGCCCTCACAAACCCAACCGTCAACTTCATCTTCTCAAAATTCCCCAATTCCTAACCCTAATTTACAACATGGAATTTCAGGTTCTCTTTCCCCAATACTCAACCACTCTCTCGGATCTCTACAGATCCACGATTCTCCAGGTCCATCAACTCCAGCTGCAGATAATTCCGGTGGACCCTCTGAACAGGTGACGGAATTAGAGTCTTCAAGTGTTATGAAGACACCTCAACGAAACTCTAGAACACAATCTAGGAGTTACTCAGGAAGACGGACAGTTGGAACGTCCCAGTCTGATGGGAAGACAGCAGGAACAGTTTCTTCTCATAGAAATCAACAGACTACCGGGTCTGTATATTCTCAAGGAAGCACCCCTTTGGCAGGGAGGAAATCTCAGATGGCGAATGCCAATCACTTGCTCAATTTTCAGTACGATCCAATATCCCGTTCTCAACAAAGGGGTCCTCCTCCCCCTCCAGCAAGAAGGCAGCGGAAGATAAGACCATACAACAAAGATCTGTTTTTGCAGGCCAATTTCAAATTCATTGTGCTAGATTCAGGAAATTATTCACCTGAGTCAATGGATCCAGATAAAATGTTGCAGTGGGAAGATATTATATGTGTGACATATTCGACCCCCTCTCCAGTACAGTGTCCAATTTGTTTGGAGCATCCCCTGTGTCCCCAAATAACCTCATGTGGACACATTTTCTGTTTCCCATGTATACTACAATACTTGATGTTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCGTTGTGCTTTGTGATGATATCTGTCAAGGATTTGTATACACTCCACATCACAAATGTCAAAGAGTATCAAGTAGGAGATAATATCGAGTTCACTTTCTTAACGAGGAAGAAGGATTCATTTACTATTTCGCATAAAAATAAACAAGAGGGTGATAATTCATCATGTGGCCAAGGCGATGTATGTGACCCCTTTTCTAAGTTCACACTCACGTCGGATGTAGATCTCTCAGTGAGACATGCAATATCAGATCTAGATGGTTGGCTGGCCAGAGCTGATTCAGGTCTTGTTGACGACCTGGAGAAGCTTCCATATGTTAGTGCTGCAATGCAGCAATTAAAGCTGAGAAAGAAGTACTGGAATGAACACAAGGCTTGTTACAATGAAAAATCTTCTAACCTCGTTGAATATGCACACCCGACACCATCAATATCTGCAAATGCTTGGGATAGTGACGATGAAAGCTGTTCTAATGGATCAAGAACTTCCTCTACTGATTTCCCTGATCAAAGTAAGGTTGTAATATTGGATAAATCAACTGCCGGAGCCTTCCAGGATGAAACTTTGAATGTGGACAAGGTACAAGTAGAGAAGGAAATAAATTTGTCTTCTTCATATGAGGAGAAAAATTGTATTCAAGGGCATTCAAATGGCATTGGAGATGCAAAGGAAAATGATTCGTACAATTTCTACCAGGCTGCTGATGGTCAACATCTAATTCTTCATCCTTTGAACACGAAGTGTTTACTGCATCATTATGGTAGCTATGATAAGCTTCCTCACAGAATAAGTGGAAGGATTCTGCAATTGGAGACAGTTACTCAATCTGAGGCTATGAGGAGGCGGTACCGATTTTTAAGTCATTTTCCGCTAACCACAATATTTCAGCTTTGTGAAGTTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAACGCGCAAACCAGAGGAAGCAACTTGCAAAGAAGGAACAGAAAGAAAAATTAAAGGCTGAAGCTACTTCTAATTATGCTCTTTCCATGTCAACCCATTATCAGTTTATTTCTCGTGATGATCCTCCCATGTTCTCCATGGATGACTTTGAAGCTCTGGGAAATTCAGCTTTGTCATCAAGTCCTCCAGTTGTTGGTGAGAGGAAATTGTTCTCAAGTGTTACTAGGCTTGGTTTTGCTGCTGGTCATGACTCTCCATCCTTTCCTACAGAATCTAGCAATCTACATAATAACAATTCAATTGCTGGTTCTTCTGGTACAGCAGGTTTGAGGAATGGGGAGACACTATCATACTCCAATGTCATATCTAGAGCAGAATCTAATGGAAGTTCGAATGCACCAAAGACAAATGAGTTTGGAAAGAAGGGAAAGAAACCAAATCGAGTTCTTCTGTCAACATCTGGTGGCAGGCGTTATTGA 2229 0.4177 MSILPSQTQPSTSSSQNSPIPNPNLQHGISGSLSPILNHSLGSLQIHDSPGPSTPAADNSGGPSEQVTELESSSVMKTPQRNSRTQSRSYSGRRTVGTSQSDGKTAGTVSSHRNQQTTGSVYSQGSTPLAGRKSQMANANHLLNFQYDPISRSQQRGPPPPPARRQRKIRPYNKDLFLQANFKFIVLDSGNYSPESMDPDKMLQWEDIICVTYSTPSPVQCPICLEHPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDCWKRCPLCFVMISVKDLYTLHITNVKEYQVGDNIEFTFLTRKKDSFTISHKNKQEGDNSSCGQGDVCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVSAAMQQLKLRKKYWNEHKACYNEKSSNLVEYAHPTPSISANAWDSDDESCSNGSRTSSTDFPDQSKVVILDKSTAGAFQDETLNVDKVQVEKEINLSSSYEEKNCIQGHSNGIGDAKENDSYNFYQAADGQHLILHPLNTKCLLHHYGSYDKLPHRISGRILQLETVTQSEAMRRRYRFLSHFPLTTIFQLCEVDLSEMLPPEALAPFMDEIKKRANQRKQLAKKEQKEKLKAEATSNYALSMSTHYQFISRDDPPMFSMDDFEALGNSALSSSPPVVGERKLFSSVTRLGFAAGHDSPSFPTESSNLHNNNSIAGSSGTAGLRNGETLSYSNVISRAESNGSSNAPKTNEFGKKGKKPNRVLLSTSGGRRY* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3075 742 MobiDBLite consensus disorder prediction 1 131 - -
Mal3g3075 742 MobiDBLite consensus disorder prediction 705 742 - -
Mal3g3075 742 ProSiteProfiles Zinc finger RING-type profile. 221 267 IPR001841 -
Mal3g3075 742 MobiDBLite consensus disorder prediction 705 720 - -
Mal3g3075 742 PANTHER RING FINGER 10 FAMILY MEMBER 81 739 IPR039739 -
Mal3g3075 742 MobiDBLite consensus disorder prediction 410 429 - -
Mal3g3075 742 MobiDBLite consensus disorder prediction 669 693 - -
Mal3g3075 742 CDD RING-HC_RNF10 221 268 - -
Mal3g3075 742 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 211 321 IPR013083 -
Mal3g3075 742 SUPERFAMILY RING/U-box 220 274 - -
Mal3g3075 742 MobiDBLite consensus disorder prediction 668 693 - -
Mal3g3075 742 MobiDBLite consensus disorder prediction 148 170 - -
Mal3g3075 742 SMART ring_2 221 267 IPR001841 -
Mal3g3075 742 Coils Coil 579 599 - -
Mal3g3075 742 ProSitePatterns Zinc finger RING-type signature. 236 245 IPR017907 -
Mal3g3075 742 Pfam Zinc finger, C3HC4 type (RING finger) 221 267 IPR018957 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3075 131 678 C3H Transcription Factor Family AT3G26730 56.560 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3075 - - gmx:100798764 1058.51