Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3058 ATGATGATGGATGAGGGAGAAGGAAAGAAAGTGGTGGTTCAGAAAACCGAGGCGTGTGGTTTCATGGCAGGTGTTGAAGGTGGTGAAGTTGGATTTGTCAACGTGAAAGGAGACAACAACAACAACAACAAGATTAACGGGTCGGGTCAACGGATCCATCATGATAATGGTTTTGTTGCTGCTGCATTTGGAACTGTTCATAGGAAGAAAAGGATGGCTAGGCAAAGAAGATCTTCATCTTCTACCATCACCATTCATCTCAAAAATCTTCCTTCTTCTACTACTACTACTACAACTACCTCGCACGTGCCAATCTCTCCAATTCCACCCCTTTTTCATTCTCTCCCTCCCGCACGTGAAATCGATCACAGGAGGTTGAGATTCCTTTTCCAAAAGGAATTGAAGAACAGTGATGTTAGCTCCCTCAGGAGAATGGTGTTGCCTAAGAAAGCAGCAGAGGCTTTCCTTCCCGCCCTTGAGTCAAAGGAAGGAATTCTTATCAGCATGGATGATATAGATGGTCTTCATGTATGGAGTTTCAAGTACAGGTTTTGGCCTAACAATAATAGTCGGATGTATGTACTTGAAAACACTGGAGACTTTGTTAGCACACATGGTCTACGCTTTGGAGATTCCATTATGGTTTACCAAGATAATCAAAATCACAATTATGTAATTCAGGCAAAGAAAGCTTGTGATCAAGATGAGTATATGGAAGAAGCTAGTGATACAATCAATCATATCTTCGTTGATGATTATGAGGTGAACAAAAGTTGCTTTGATGTAGCCTATCCTGCAATGAATGATACAAGCATGTCATTTATATATGACACAACCATCTCAAATGACTCACCACTTGATTTTTTGGGTGGATCAATGACCAATTACTCAAGAATTGGATCAGTTGAAACATTTGGCTCTGTTGAGAATCTGTCACTTGATGACTTCTATTGA 954 0.4057 MMMDEGEGKKVVVQKTEACGFMAGVEGGEVGFVNVKGDNNNNNKINGSGQRIHHDNGFVAAAFGTVHRKKRMARQRRSSSSTITIHLKNLPSSTTTTTTTSHVPISPIPPLFHSLPPAREIDHRRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPALESKEGILISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVSTHGLRFGDSIMVYQDNQNHNYVIQAKKACDQDEYMEEASDTINHIFVDDYEVNKSCFDVAYPAMNDTSMSFIYDTTISNDSPLDFLGGSMTNYSRIGSVETFGSVENLSLDDFY* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3058 317 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 58 317 IPR044800 GO:0003700
Mal3g3058 317 SMART B3_2 130 232 IPR003340 GO:0003677
Mal3g3058 317 Gene3D - 126 246 IPR015300 -
Mal3g3058 317 ProSiteProfiles B3 DNA-binding domain profile. 130 232 IPR003340 GO:0003677
Mal3g3058 317 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 58 317 - -
Mal3g3058 317 Pfam B3 DNA binding domain 130 227 IPR003340 GO:0003677
Mal3g3058 317 MobiDBLite consensus disorder prediction 73 105 - -
Mal3g3058 317 MobiDBLite consensus disorder prediction 77 105 - -
Mal3g3058 317 CDD B3_DNA 128 230 IPR003340 GO:0003677
Mal3g3058 317 SUPERFAMILY DNA-binding pseudobarrel domain 128 231 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3058 Mal-Chr3 105573223 105576381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3058 46 317 B3 DNA Binding Superfamily AT3G26790 49.677 4.79e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g3058 B3 1.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3058 - - gmx:100783961 410.223