Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3046 ATGTCGTTTCCGTGTGACTATTGCGACACAAGAAGCGCGGTGCTATATTGCAAACCAGACTCCGCGAAACTCTGTTTAGTATGCGACCAGCACGTGCACTCCGCGAACGCACTCGCACTCAAGCACGTGCGATTCCAAATCTGCCAAAACTGCAAAAACGACGCCGCTTCAGTTCGTTGCATCACCGAAAACCTAGTTCAATGTCACCGCTGCGATTGGAACTCTCACGGCGGTGATTCCTCTTCCCACCACCACGACCGCCGCCGTCTCGACGGTCTCACCGGTTGTCCCTCCGTTCACGAGATCGTCACCACTTTGGAGCTTGATTTGAAGCCGAACGACGCCGTTTTTGTCTGCGATGGTCCGGTTGTTCCAGTTGTGAAGAATAGAGATGAGGTGTATGAACAAGTAGTGGAAGTTGCGAAGAGGAAGAGAAATTTGGAGGAAGATGATAATGAGTTCAGATTCGATGATTGTTGTAATGAAGTTGATGATTTGTTGTTGCTTCAGCATACTCCGTTTACTTCTTTGCTTAATTTTTCGTCTGAATTTGATGTTGGTGCTAAGAGAAATAGTAATGAGTATGGAAATGAAGGTGGCGTTCTTCTTTGGGATCGTAATCCAACGTATCAACCTCCTCAGCTTTCTGTGACTGCGTGA 660 0.4758 MSFPCDYCDTRSAVLYCKPDSAKLCLVCDQHVHSANALALKHVRFQICQNCKNDAASVRCITENLVQCHRCDWNSHGGDSSSHHHDRRRLDGLTGCPSVHEIVTTLELDLKPNDAVFVCDGPVVPVVKNRDEVYEQVVEVAKRKRNLEEDDNEFRFDDCCNEVDDLLLLQHTPFTSLLNFSSEFDVGAKRNSNEYGNEGGVLLWDRNPTYQPPQLSVTA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3046 219 CDD Bbox1_BBX-like 4 47 - -
Mal3g3046 219 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mal3g3046 219 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mal3g3046 219 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED 3 215 - -
Mal3g3046 219 Coils Coil 130 150 - -
Mal3g3046 219 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3046 Mal-Chr3 105437173 105439450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3046 5 111 C2C2-CO-like Transcription Factor Family AT2G33500 57.009 7.89e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g3046 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3046 - - gmx:100801439 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3046 3 105437173 105439450 Mal3g3046 3 105437173 105439450 ECH