Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3043 ATGGGTCGTTGCCCATGTTTTGGGTCTAGAAAGAAGGGAAAAGAGAAGAACCTCAATGATCAAGAAGATGAAAAGAACCTTAAATCTGTTGGGAGTACTGTCTCTTTTTCTGGAAGATCTTTAGAACGGAGTTCAGAAGCTTCTCCAGTAGAGCATATCGACGGTTCTAATAAGGGTCGAATCTTTACCTTCAGAGAACTTGCGACGGCAACAAAAAATTTTAGGGATGAAACCTTTATTGGGCAAGGTGGATTTGGAACTGTTTACAAAGGAAAACTAGATAGCATTAGTCAGGTTGTAGCTGTTAAAAGACTTGATACAACTGGTGTCCAAGGGGAGAAAGAATTTCTAGTGGAGGTTCTCATGCTCTCTCTTCTACACCATCCCAACCTTGTTAGTATGATTGGTTACTGCGCGGAAGGAGATCAACGACTTCTTGTGTACGAATACATGCCTTTGGGATCCTTAGAATCTCATCTACATGATCTTTCGCCGGATAAAGAACCTCTTGATTGGAATACAAGAATGATGATAGCTGCAGGGGCCGCAAGAGGACTAAATTATCTCCACCATGAAGCGAAGCCTTCTGTTATATATAGAGATTTGAAATCATCCAACATACTATTGGATGAAGGATTCTATCCGAAGCTTTCTGATTTCGGGCTAGCGAAATTCGGTCCAACTGGAGATCAATCATATGTTGCTACTAGAGTCATGGGAACACATGGTTATTGTGCACCTGAGTATGCAACTACTGGAAAATTAACAATGAGATCTGACATCTATAGTTTTGGAGTTGTGTTATTGGAGCTAATTACTGGACGTAGAGCGTATGATGATACTCGTGACCATGAAAAGCATCTTGTTGATTGGGCACGGCCGCTGTTCAGAGACAGAAAGAATTTTGTAAAATTAGTAGATCATCGTTTGCAAGGTCACTACCCTATATCAGGTCTAAGGATGGCTGTTCAAATGGCATGCATGTGTCTTCGAGAAGAGCCACGTCACCGGCCTCCTGCAGGCGATATAGTACTAGCCCTAGGTTACTTGTCATCCAAGAAATATTTTCCAAGAGTATCCGGAACAGTTAGCCCAGGAGGGATGGAGAACGACATTGAATCCCCGAATGAAACAACAATGATTTTGGCTAAAGATTCGCTAAGAGAGCAAGCTGTTGCAGAGGCCAAACAGTGGGGGGAGTCATGGAGAGAGAAGAGAAAACAAAGTGGCCAAAATAGTCCTAATGAAATAAGGAGGTAG 1260 0.423 MGRCPCFGSRKKGKEKNLNDQEDEKNLKSVGSTVSFSGRSLERSSEASPVEHIDGSNKGRIFTFRELATATKNFRDETFIGQGGFGTVYKGKLDSISQVVAVKRLDTTGVQGEKEFLVEVLMLSLLHHPNLVSMIGYCAEGDQRLLVYEYMPLGSLESHLHDLSPDKEPLDWNTRMMIAAGAARGLNYLHHEAKPSVIYRDLKSSNILLDEGFYPKLSDFGLAKFGPTGDQSYVATRVMGTHGYCAPEYATTGKLTMRSDIYSFGVVLLELITGRRAYDDTRDHEKHLVDWARPLFRDRKNFVKLVDHRLQGHYPISGLRMAVQMACMCLREEPRHRPPAGDIVLALGYLSSKKYFPRVSGTVSPGGMENDIESPNETTMILAKDSLREQAVAEAKQWGESWREKRKQSGQNSPNEIRR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3043 419 CDD STKc_IRAK 80 344 - -
Mal3g3043 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mal3g3043 419 Pfam Protein kinase domain 75 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3043 419 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Mal3g3043 419 PANTHER OS07G0668900 PROTEIN 5 361 - -
Mal3g3043 419 Gene3D Phosphorylase Kinase; domain 1 34 150 - -
Mal3g3043 419 MobiDBLite consensus disorder prediction 392 419 - -
Mal3g3043 419 MobiDBLite consensus disorder prediction 8 27 - -
Mal3g3043 419 SUPERFAMILY Protein kinase-like (PK-like) 53 347 IPR011009 -
Mal3g3043 419 MobiDBLite consensus disorder prediction 1 31 - -
Mal3g3043 419 MobiDBLite consensus disorder prediction 398 413 - -
Mal3g3043 419 Gene3D Transferase(Phosphotransferase) domain 1 151 358 - -
Mal3g3043 419 SMART serkin_6 74 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g3043 419 PANTHER OS07G0668900 PROTEIN 5 361 - -
Mal3g3043 419 ProSiteProfiles Protein kinase domain profile. 74 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3043 Mal-Chr3 105427529 105430645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3043 59 403 Glycoside Hydrolase AT3G07070 58.286 2.74e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal3g3043 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3043 K13430 - gmx:100809298 583.948