Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3040 ATGGCTATAGATAAGCATGCTACAATTGTTTTGGAAGATGGTACGCAATTTCCTGTTGGATTCAAATTTGATCCAACAGATCACGAGCTTGTCGATTATTACTTGACAAGAAAAGTTTGTAACCAACCACTTCCAATTTCCCTGTTAGAAATTGATGTATTTCGATCTGAGCCATGGAGGCTGATGGAAGATAATATGACCTCTTTCAAGCATAGGGGGTATTTTTTCTTTGATACCAAGAACCTTAGGTTCGAGAATCTGAATATAAGACCAGTTGGAAACGGTGAGTGGAGAATTTTAAAAAAGAACGAGGAACTTGCTCTTTCTAACAAAATGGAAGGGAATCAAGCTGTGATGACACAATGGAGGATGGATGAATTTTTCATCAGTACAATTTGTCATCCAACTAAGGTGGCAGCTGTAGGTGCTTATCGGATATTTAAGGTGGAGGCTACAAAGGGTGAGAAGAAGAAGAAGGTTCCCACACCAACTGTGATTGATTTCACAATGGATAATGAAAGTGTCTCAGCCCCTCCAGCTCCCTCTCCATAA 552 0.3986 MAIDKHATIVLEDGTQFPVGFKFDPTDHELVDYYLTRKVCNQPLPISLLEIDVFRSEPWRLMEDNMTSFKHRGYFFFDTKNLRFENLNIRPVGNGEWRILKKNEELALSNKMEGNQAVMTQWRMDEFFISTICHPTKVAAVGAYRIFKVEATKGEKKKKVPTPTVIDFTMDNESVSAPPAPSP* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3040 183 Gene3D NAC domain 26 160 IPR036093 GO:0003677|GO:0006355
Mal3g3040 183 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 150 - -
Mal3g3040 183 Pfam No apical meristem (NAM) protein 18 127 IPR003441 GO:0003677|GO:0006355
Mal3g3040 183 ProSiteProfiles NAC domain profile. 17 172 IPR003441 GO:0003677|GO:0006355
Mal3g3040 183 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 150 - -
Mal3g3040 183 SUPERFAMILY NAC domain 13 149 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3040 Mal-Chr3 105388774 105389913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3040 17 165 NAC Transcription Factor Family AT5G17260 26.901 3.18e-16 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g3040 NAM 3.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3040 - - cam:101501671 162.155