Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3039 ATGGCTGTAGATAAGCATGCTAAGATTGTTTTGGAAGATGGTACCCAGCTACCTGTTGGATTCAGGTTTGATCCAACTGATCAAGAGCTTGTCGATTATTACTTGACAAGAAAAGTTTGTAACCAACCACTTCCAATTTCCCTGTTAGAAATTGATGTATTTCGATCTGAGCCATGGAGGCTGATGGAAGATAATATGACCTCTTTCAAGCATAGGGGGTATTTTTTCTTTGATACCAAGAACCTTAGGTTCGAGAATCTGAATATAAGACCAGTTGGAAACGGTGAGTGGAGAATTTTAAAAAAGAACGAGGAACTTGCTCTTTCTAACAAGCACTTCCTTGGGAGAAAGAACACATTTGTTTTCTGGAGAATGGAAGGGAATCAAGCTGTGATGACACAATGGAGGATGGATGAATTTTTCATCAGTACAATTTGTCATCCAACTAAGGTGGCAGCTGTAGGTGCTTATCGGATATTTAAGGTGGAGGCTACAAAGGGTGAGAAGATGAAGAAGTGTGATTGA 525 0.3981 MAVDKHAKIVLEDGTQLPVGFRFDPTDQELVDYYLTRKVCNQPLPISLLEIDVFRSEPWRLMEDNMTSFKHRGYFFFDTKNLRFENLNIRPVGNGEWRILKKNEELALSNKHFLGRKNTFVFWRMEGNQAVMTQWRMDEFFISTICHPTKVAAVGAYRIFKVEATKGEKMKKCD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3039 174 Pfam No apical meristem (NAM) protein 18 140 IPR003441 GO:0003677|GO:0006355
Mal3g3039 174 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
Mal3g3039 174 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 162 - -
Mal3g3039 174 Gene3D NAC domain 26 169 IPR036093 GO:0003677|GO:0006355
Mal3g3039 174 SUPERFAMILY NAC domain 14 162 IPR036093 GO:0003677|GO:0006355
Mal3g3039 174 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3039 Mal-Chr3 105377668 105378731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3039 17 162 NAC Transcription Factor Family AT5G17260 30.667 2.06e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g3039 NAM 3.5e-20 No_clan