Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3038 ATGGCTGTAGATAAGCATGCTAAGATTGTTTTGGAAGATGGTACCCAACTACCTGTTGGATTCAGGTTTGATCCAACTGATCAAGAGCTTGTTGATTATTATCTGATAAGGAAAGTTTGTAACCAACCTCTTCCAATTTCTTTGTTAGAAATTGATGTATTTCAATCTGAGCCATGGAGGCTGCCGGAAGATAATAGGACCTCTTCAAAGCAAATGAGGTACTATTTCTTTGATACCAGAAACCTACGGTTCGAGAATATGAATTTAAGACCAGCTGGAAATGGTGAATGGAGACTATTGAAAAGGAACGAAGAACTTGCTCTTTCAAACAAGCACTTCATTGGGAGAAAGAACACATTTGTTTTCTCGAGAATGGAAGGGAATCAAGTTGTGATGACACAATGGAGGATGGATGAATTTGGCATCAGTACAATATATCATCCAACTAAGGTGGCAGCTATAAGTGCTTATCGGATATTTAAGATGAAGGCTGCAAAAGCTGAGAAGAAGAAGGTCCTCACACCAACCGTGATTGATTTCACTATGGATGATGGAAGTGTCTCAGCCCCTCCAGCTCCCTCTCCCTGA 588 0.4048 MAVDKHAKIVLEDGTQLPVGFRFDPTDQELVDYYLIRKVCNQPLPISLLEIDVFQSEPWRLPEDNRTSSKQMRYYFFDTRNLRFENMNLRPAGNGEWRLLKRNEELALSNKHFIGRKNTFVFSRMEGNQVVMTQWRMDEFGISTIYHPTKVAAISAYRIFKMKAAKAEKKKVLTPTVIDFTMDDGSVSAPPAPSP* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3038 195 Gene3D NAC domain 26 168 IPR036093 GO:0003677|GO:0006355
Mal3g3038 195 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
Mal3g3038 195 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 166 - -
Mal3g3038 195 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 166 - -
Mal3g3038 195 SUPERFAMILY NAC domain 14 147 IPR036093 GO:0003677|GO:0006355
Mal3g3038 195 Pfam No apical meristem (NAM) protein 18 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3038 Mal-Chr3 105360362 105361462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3038 15 143 NAC Transcription Factor Family AT5G04410 34.848 2.50e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g3038 NAM 1.7e-21 No_clan