Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3035 ATGGCAGACCCTTCTGCCATCTACGAATTCCTCATGAAGCAGCAACAACAACAAATTTCATCATCACCAAGAGCAACAAGTGGTAGAAGATCAAACCCACAATCTTCTTCAACAAAAACTTTTCAGTGTCAATATTGTCACCGTAAGTTCTACACTTCTCAAGCTCTTGGTGGTCACCAAAATGCTCACAAACTTGAAAGAGCTGCTGCTAGAACAAGAACCATCAACCTCAACAACACCAACACCACCACCACCAACAATCTTGTTTCTTATTCATCACCACCACAACCACAACCATTTTCTTTACCCTTAACTTTGTCTGAACATGAACATGAACATGAACATGAACATGGTGGTTTCTTTAACCATCAGCATCATTACCCTTATTGGCAACAACTTGAACAAATGGAACCTTTACAGTTTCAAACACCAACAAACACTCTTCCTATGGTTCCTTGCAATGGTTATGGTTATGGTTATGATGTTGCTTCTGCTGGTTTTGGTGCTTCATCTTCAACTCCTCACTATGTTTTCTCCAACAATGATTCTGTTTCTCCACCTCAGTTTGTTGATGCTTCTGACCATGTCAATCTTGATCTCAGTCTTCACCTCTGA 615 0.4033 MADPSAIYEFLMKQQQQQISSSPRATSGRRSNPQSSSTKTFQCQYCHRKFYTSQALGGHQNAHKLERAAARTRTINLNNTNTTTTNNLVSYSSPPQPQPFSLPLTLSEHEHEHEHEHGGFFNHQHHYPYWQQLEQMEPLQFQTPTNTLPMVPCNGYGYGYDVASAGFGASSSTPHYVFSNNDSVSPPQFVDASDHVNLDLSLHL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3035 204 PANTHER ZINC FINGER PROTEIN JAGGED 14 204 IPR045320 GO:0003700
Mal3g3035 204 Gene3D Classic Zinc Finger 13 94 - -
Mal3g3035 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Mal3g3035 204 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Mal3g3035 204 MobiDBLite consensus disorder prediction 78 95 - -
Mal3g3035 204 MobiDBLite consensus disorder prediction 15 40 - -
Mal3g3035 204 PANTHER OS02G0182300 PROTEIN 14 204 - -
Mal3g3035 204 SUPERFAMILY beta-beta-alpha zinc fingers 38 68 IPR036236 -
Mal3g3035 204 MobiDBLite consensus disorder prediction 78 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3035 Mal-Chr3 105295034 105295648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3035 36 87 C2H2 Transcription Factor Family AT5G14010 61.538 1.00e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal3g3035 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3035 - - mtr:MTR_7g083210 198.364