Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3015 ATGGCGCTACAGAACATTGGTGCTGGCAACAGCGATGATGCCTTTTACAGGTACAAGATGCCTAGAATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACAAATATTGTCAATATGGTTGACATCGCAAAAGCTTTAGCAAGGCCAGCCTCTTACACAACCAAGTATTTTGGTTGTGAACTTGGAGCACAGTCGAAATTCGATGAGAAAACTGGGACTTCTCATGTCAACGGAGCACATGATACTGCGAAACTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATACGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATTACTAAGACTCAAATGATCCAGATGAAATGTGCTGCTTGTGGTTTTGTGTCTGACGTGGATATGAGAGACAAGCTGACTACGTTCATCATTAAGAACCCACCAGAAACGAAGAAAGGTTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTCAAGGAAGGTGAAGCAGCTGATGAGGAGCTGAAAAAGCTGAAGAAAGAGGCTGCCAAAAAGAAGGGAACTAAGGAAAGCACCGGAAAATCAGGCTCTTCAAAGAAAAAAGGGAATGGCTCTGATGAAGATCATACATCTCCTACTCATAGTCCAGTTCATGAGAAGGATGAGGCTGATGATGAAGATGATGTACAATGGCAAACAGACACATCACTGGAGGCTGCTCGTCTACGGATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAACTGAACCTGAACCAGAGAAGGAGAAAGCAGCAACTAAGGTAAGTGACAATCCTGGTAATGGTAACTCCATGAACTACCGGACTCTGGTTGGTGAAATCAAAGCTGATTTGAAGAAAGGTGCTTCGGCCAAAGAATTGGTGACCCATTGGGCATCACTTCCTGTGTCTCCACAAGAAAAGATGAGTGCTCTGTATGAAGCCCTATTTGGTGACATTGAGAAAGGGTTTGCAAAAGAAGCAGTTAAGAAGAAGAACTACCTTGCTGCTGCAGTTGCTGTGGAAGAGGGTATGCCGTTGCTGTTGCTGCGCGCAATCGAGGAATTTTCTTGCAAGTCCACTTCCAATGCGCTCAAGGAGGTTGCCCTGGTTCTGAAGGCACTCTATGATGCTGATGCGTTGGAGGAAGAGCACATATTGCAGTGGTATCAAGAAGGGATGAAAGGAGACACCAAGAACTCTCAGATTTGGAAGAATGTTAAACCCTTCATCGAGTGGCTTCAGAGTGCAGAATCAGAGTCGGAGGAAGAATAG 1317 0.448 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQMKCAACGFVSDVDMRDKLTTFIIKNPPETKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKEAAKKKGTKESTGKSGSSKKKGNGSDEDHTSPTHSPVHEKDEADDEDDVQWQTDTSLEAARLRIQEQLSAVTADMVMLSTTEPEPEKEKAATKVSDNPGNGNSMNYRTLVGEIKADLKKGASAKELVTHWASLPVSPQEKMSALYEALFGDIEKGFAKEAVKKKNYLAAAVAVEEGMPLLLLRAIEEFSCKSTSNALKEVALVLKALYDADALEEEHILQWYQEGMKGDTKNSQIWKNVKPFIEWLQSAESESEEE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3015 438 MobiDBLite consensus disorder prediction 143 232 - -
Mal3g3015 438 MobiDBLite consensus disorder prediction 148 223 - -
Mal3g3015 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 363 438 IPR003307 GO:0005515
Mal3g3015 438 Coils Coil 170 190 - -
Mal3g3015 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 438 IPR045196 GO:0003743|GO:0006413
Mal3g3015 438 MobiDBLite consensus disorder prediction 263 285 - -
Mal3g3015 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Mal3g3015 438 ProSiteProfiles W2 domain profile. 278 438 IPR003307 GO:0005515
Mal3g3015 438 SUPERFAMILY ARM repeat 287 432 IPR016024 -
Mal3g3015 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Mal3g3015 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Mal3g3015 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 438 - -
Mal3g3015 438 Gene3D - 3 104 - -
Mal3g3015 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Mal3g3015 438 CDD W2_eIF5 321 431 - -
Mal3g3015 438 SMART 542_3 346 434 IPR003307 GO:0005515
Mal3g3015 438 Gene3D - 105 145 - -
Mal3g3015 438 Gene3D - 283 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3015 Mal-Chr3 105010391 105011707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3015 1 431 Eukaryotic Initiation Factors Gene Family AT1G36730 65.393 0.0 511