Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3001 ATGGACGCTTCGACTTCCGTAGTAAGTGGCTCACAACCCGTATCGCCGTTGAACAATCCCGAAACAGCCGCGACTGAGGGTATGGGAAATGTTTGCTTGTCCGATGAAAACATGAGTGATGCTTCTGAGGACGAGTTAGAATACAATGATAATGTTGAATTTTCTGGATTAGAATTCACTGATGAAACAGCTGTTAATGGTTTGGAGGACATCTGGAAAATCAACTTCACAAATTTAAGAGTGGAAGATGTAATTAAGTACCACTTTTCAGACGTTGGGGTGGCATACTTATTTTATAATTGGTATGCTGGTTTGCATGGTTTTGCTGCAAGGAAGAGCAAGATAATGAGGAACAAAAATGGGGAAAAAACACAACAAATGTTCTTGTGTTATAGACAGGGACACCGAGAAGAAAAAGTTGGAAGCACAAGTCGAAAAAGAGAACCAAAGCCACTCACAAGATGCGGCTGTGATGCAAAATGTAGGGTTCACATTGATGTTAATAGTGGCCGGTGGTACATTAAGTATCTAAATGATGTCCACAACCATACTTTGTTGGATAGTAAGTTCATGGGCATGCTACCGGCACATAGAAAAATGAATGACTACGACAAATTTCAAATGAACAGCATGAGGAAGGTTGGAATTAGGACTTCAAATATTTATGGTTGGTTTGCTTCTCAGGCTGGAGGATTTGAGAAAGTTGGTTTTAATAAACGTGACATGTATAATGAGCAAGGGAGACAAAAACAAACTGAATACACAGATGCAGATGCTGCTTTGGATTTTCTAAACAACATGGGTAAGAGTGATGAAAAGTTGTTTTTTAGACATGTTGTTAATGAAGATGGAAGTTTGTTACATCTGTTTTGGTGTGATCGGGTTGCGCAGAATGATTATTCAGTGTTTGGTGATGTGCTTGCATTCGATGCGACTTATGGAAAAAATAGATACAAGTGTCCCGTTGTTATTTTTTCTGGGGTAAACCACCACAATCAAACTATTGTGTTTGCTAGTGCCATTGTTGGAAATGAAAAGGAAGAAACGTATGTTTGGTTACTTGAAAACTTGGTTGAAGCAATGGGAGGTAAAACTCCAAAGTCAGTTATTACAGATGGAGACAAGTCTATGAGGAATGCAATCAAAAGGGTCCTTCCTAATTCCCATCATCGGTTATGCGCTTGGCACTTGCTACGCAACGCAACAAGTAACGTAGGCAATACCGCGTTTGTGCCTAAGCTAAGACAGTGCATGTTGGGTGATTATGAAGTTCATGAGTTTCAACGGAAGTGGGATAAAATGGTTGCGGAGTTTGGATTGGAAGAGAATACATGGGTTGCAGAAATGTTCGAGAAGCGAAGTATGTGGGCCACAGCCCACATACGAGGTAACTTCTTTGCTGGTTTCAGAACGACGTCTCGATGTGAGGGGCTGCACTCGTTTTTGGGAAAATATGTTAACTATGAAAACAACCTGTTGGAGTTCTTACAACATTTTTTCCGTGCTCTTAGTTATATGAGGTTCAGAGAAGTGCAAGTTGACTTTCAGTCATCACATGGACAAGTTGTGTTGCAAACACAATTGCAAGCTCTTGAGAAGTCTGCGGCAGCTGTATACACCAAGGAGGTATTTTTGCTTTTCCGACCTTTTCTTGAAAGATCATGCACATGTAGGGTCGTAAATTGCAAGCAAACAACATCATTGTATAAATATAAAGTGTCCAAGTATTGCAGAAATGGTCTGGAGTGGATTGTAACATTTTGCCCATTGAGTCCGGATTTTAAGTGTTCTTGTCAGCGGTTTGAATCATTAGGTATTCCTTGTGAACATGTGGTGTGTGTTTTGGTAAATATGGACATTGTGCGAATTCCAGAATGTTTGGTGCTGAAAAGGTGGACAAAGACAGCTAAGGACTCACTTGTTTTCAATGGCAACATGTCTGCAACACAAGATCCATCATTGATTAGTCAATATGTGGGTATGGTGGAGAAGTGTAAGAAGATGGCATTGGCGGCTGTGTCTTGTGGCAGACCACAGTATGTGCGTAGTACAATGGATTGGGTGACTTCACGTACACAAATGTTGGAAGCACTGGCTAAAGGTGTTGGGGGACCACAACAAGATTCAACACCGCAACATGATGATATTCTTGAAGGCTCACTAAGGAACCCAACCAGGGTGAGGACAAAGGGTTGTGGTGCCTCGTCCTCGTCAGTGCAAAGCAACGGTAAACAAACTGCAAGAAGGGTACAAACATGTGGAATATGCAGGTTAGAGGGTCACAACCGAAAATCGTGTCGCTTTACGAGTCATGTAGAGTATATGGCTCAAACTCAAGTTGGTTCAAATATTATATTTGAGGGAGAAGAAGACGAAGAGGAAGTTGATGATTTTGGTGATGTCCATCCACATACGGTAAATAACTTATAA 2430 0.4107 MDASTSVVSGSQPVSPLNNPETAATEGMGNVCLSDENMSDASEDELEYNDNVEFSGLEFTDETAVNGLEDIWKINFTNLRVEDVIKYHFSDVGVAYLFYNWYAGLHGFAARKSKIMRNKNGEKTQQMFLCYRQGHREEKVGSTSRKREPKPLTRCGCDAKCRVHIDVNSGRWYIKYLNDVHNHTLLDSKFMGMLPAHRKMNDYDKFQMNSMRKVGIRTSNIYGWFASQAGGFEKVGFNKRDMYNEQGRQKQTEYTDADAALDFLNNMGKSDEKLFFRHVVNEDGSLLHLFWCDRVAQNDYSVFGDVLAFDATYGKNRYKCPVVIFSGVNHHNQTIVFASAIVGNEKEETYVWLLENLVEAMGGKTPKSVITDGDKSMRNAIKRVLPNSHHRLCAWHLLRNATSNVGNTAFVPKLRQCMLGDYEVHEFQRKWDKMVAEFGLEENTWVAEMFEKRSMWATAHIRGNFFAGFRTTSRCEGLHSFLGKYVNYENNLLEFLQHFFRALSYMRFREVQVDFQSSHGQVVLQTQLQALEKSAAAVYTKEVFLLFRPFLERSCTCRVVNCKQTTSLYKYKVSKYCRNGLEWIVTFCPLSPDFKCSCQRFESLGIPCEHVVCVLVNMDIVRIPECLVLKRWTKTAKDSLVFNGNMSATQDPSLISQYVGMVEKCKKMALAAVSCGRPQYVRSTMDWVTSRTQMLEALAKGVGGPQQDSTPQHDDILEGSLRNPTRVRTKGCGASSSSVQSNGKQTARRVQTCGICRLEGHNRKSCRFTSHVEYMAQTQVGSNIIFEGEEDEEEVDDFGDVHPHTVNNL* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3001 809 ProSiteProfiles Zinc finger SWIM-type profile. 571 619 IPR007527 GO:0008270
Mal3g3001 809 MobiDBLite consensus disorder prediction 1 25 - -
Mal3g3001 809 PANTHER OS02G0262500 PROTEIN 83 666 - -
Mal3g3001 809 SMART 26again6 594 621 IPR006564 GO:0008270
Mal3g3001 809 Pfam SWIM zinc finger 596 614 IPR007527 GO:0008270
Mal3g3001 809 MobiDBLite consensus disorder prediction 1 27 - -
Mal3g3001 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 666 IPR031052 GO:0006355
Mal3g3001 809 Pfam MULE transposase domain 306 400 IPR018289 -
Mal3g3001 809 Pfam FAR1 DNA-binding domain 98 186 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3001 Mal-Chr3 104820855 104823378 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g3001 MULE 5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3001 - - ccaj:109791994 665.996