Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2988 ATGAAACCTCTTCTTCATCCATCTTCTTTTCACTTTTTCTCCTTGACACTTTTAATGATCTTCATCATCAATATTCCAACGTGTCAATGTGATGATGAATACACGGACTGCAACAAAGCTTTCGACTGCGGAGACAGCGTCACCAATCTCAAGTATCCATTCTGGGATGAAAACAGAGGAAAGGATTGTGGTTTTTCTGATCCTAATATGGAGCTCACATGCGAAGAAAAAGTTCCAAAGATCAGAATCAATAACGTCAAATACCGTATTCTTAAATGGGGGAATACAACACAGATACTCACAGTCGCCAGAGACGATTACTGGAGTGGTATTTGTGCTGTGAATGTGAGTGGTAGTCTTGAGAGCAGCACATTGGATAACACTCAGTTTCAACGTGATGGTGGTGATTTTTCTCAAGTAAATCTTTTATACAATTGTGATACAACTCTACCGAGTATGGTTTATAGTACTACCTGCAGAGGTAATATTGAAGTTGTGTACACCCTTTCGGATCCTCATTCGGTCTCACTCACATGTACTCCGAGTGTTATTGTTCAGATTCCGGTTTCAGTAACCCAAGCTGCACAAATTTCAAATCTCAATGATATAAACAATGCATTACAAGGCGGTTTTGATTTGAGATGGACGGGAAATTATGCAGACTGCCAGAGGTGCGTTGGTTCTGGTGGTGCATGTGGCAACGATGGAGGAAATGAATCCAGATGTTTCTGCCAAGATGGATCTTATAGAGATAGATGCGGTTCACAGAAGGCCCCATCCTCAAGTGCTGTAGCTGCTGGATGTGGAGTGGTAGTGGTCTTTATTATTATGATATGTTGTTACCTTAGAAGGGGTAAAGGTAGACAGCAAATGAGTATTTTCAGGAAAAGAAGAAAACTTGTTGACCACAATGTAGAGGTTTTAAAAAATTTCTCTTCCCACCTTCAAGTTTTCTCCCCCACACCGCAAAATGATGCAAATGTCCATTCGAGCGACCACACTGTAGAGGTTTTCATGCAAGGTTATAATTTATCCATGCCAAGAAGATATAGTTATACAGAAGTAAAAAGGATAACAAACTCTTTCCGAGATAAATTAGGACAAGGAGGATATGGTGTTGTGTACAAAGCAAGTTTAATTGATGGTCGTGAAGTGGCGGTGAAAGTAATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACATCTCACATGAACATTGTGTCCCTTTTAGGCTTTTCTTATGAGGGTAATAAAAGAGCACTAATATATGAATTCATGCCCAAAGGATCATTGGACAAGTTTATCTATAAAAGCGAATTTCCTAATGCTATTTGTGATTTTGATTGGAACACTTTGTTCCAAATTACAATTGGCATTGCTAGAGGTCTAGATTACTTGCATCAAGGATGTAGTTCAAGGATTTTGCATCTTGATATAAAGCCTCAAAACATTCTTTTGGATGAAGATTTTTGCCCAAAAATCTCTGATTTTGGACTAGCGAAAATATGTCAAAGGAAGGATAGTATTGTGTCAATACTAGGTACAAGAGGAACTATAGGATATATGGCACCAGAAGTATTTAGTAGAGCATTTGCTGGAGTTTCTTACAAATCTGATGTATATAGTTATGGCATGTTGATTCTTGAAATGATCGGAGGAAGGAAGAACTACGACACTGGAGGATCTTGTACTTCTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAGCAAGGTAATACTCTTTCAAATTGTTTGATAGTCTCGGAGGAAGAAAATGATATAGTTAGAAAGATGACTTTGGTGAGTCTATGGTGCATTCAAACCAAACCATTAGACAGACCACCAATGAATAAAGTAATAGAAATGTTGCAAGGACCACTCTCATCAGTGTCATATCCTCCGAAGCCCGTCTTACATTCACCTGAAAGGCCACCACTGCAAGTGTCCGATATGTCTTCATCCGATTTGTATGAGATAGATTCAATTACAATATCAAAATAA 2034 0.3835 MKPLLHPSSFHFFSLTLLMIFIINIPTCQCDDEYTDCNKAFDCGDSVTNLKYPFWDENRGKDCGFSDPNMELTCEEKVPKIRINNVKYRILKWGNTTQILTVARDDYWSGICAVNVSGSLESSTLDNTQFQRDGGDFSQVNLLYNCDTTLPSMVYSTTCRGNIEVVYTLSDPHSVSLTCTPSVIVQIPVSVTQAAQISNLNDINNALQGGFDLRWTGNYADCQRCVGSGGACGNDGGNESRCFCQDGSYRDRCGSQKAPSSSAVAAGCGVVVVFIIMICCYLRRGKGRQQMSIFRKRRKLVDHNVEVLKNFSSHLQVFSPTPQNDANVHSSDHTVEVFMQGYNLSMPRRYSYTEVKRITNSFRDKLGQGGYGVVYKASLIDGREVAVKVINESKGNGEEFINEVASISRTSHMNIVSLLGFSYEGNKRALIYEFMPKGSLDKFIYKSEFPNAICDFDWNTLFQITIGIARGLDYLHQGCSSRILHLDIKPQNILLDEDFCPKISDFGLAKICQRKDSIVSILGTRGTIGYMAPEVFSRAFAGVSYKSDVYSYGMLILEMIGGRKNYDTGGSCTSEMYFPDWIYKDLEQGNTLSNCLIVSEEENDIVRKMTLVSLWCIQTKPLDRPPMNKVIEMLQGPLSSVSYPPKPVLHSPERPPLQVSDMSSSDLYEIDSITISK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2988 677 MobiDBLite consensus disorder prediction 644 663 - -
Mal3g2988 677 Pfam Wall-associated receptor kinase C-terminal 177 247 IPR032872 -
Mal3g2988 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Mal3g2988 677 PANTHER TYROSINE KINASE FAMILY PROTEIN 20 674 - -
Mal3g2988 677 Gene3D Transferase(Phosphotransferase) domain 1 435 642 - -
Mal3g2988 677 Gene3D Phosphorylase Kinase; domain 1 334 434 - -
Mal3g2988 677 SMART serkin_6 360 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2988 677 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Mal3g2988 677 SUPERFAMILY Protein kinase-like (PK-like) 338 634 IPR011009 -
Mal3g2988 677 ProSiteProfiles Protein kinase domain profile. 360 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2988 677 Pfam Protein kinase domain 364 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2988 677 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 674 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2988 Mal-Chr3 104633922 104636716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2988 17 666 Receptor kinase-like Gene Family AT5G38260 39.734 1.71e-150 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal3g2988 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2988 - - cam:101489912 859.751