Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2985 ATGCTTCATCATCCATCTTCTTCCATTATTATTTTCTTTTTCTACTTCACCCTTTTGATAATCTCAATCATTAATATTCCAACATGTATGTGCGATGATGATGATGACCAATACGCAAACTGCAACAACGCTTTTAACTGCGGAAGCAGCATCGCGGACATCAAGTATCCATTCTGGGGAGAAAACAGAGAAAAATATTGTGGTGCCGTTTCTTCTGATCCTAATATGGAGCTTACATGTGAAGAAAAAGTCCCAAAGATCACAATCAATAATGTGAAATACCGTATTCTTGATTGGGACGATACAATACAGAAACTCACAGTCGCCAGAGACGATTACTGGAGTGGTATTTGTGCTGTGAATGTGAGTGACAATCCTAAGAACAGTATATTCAGTAACACTTTGTTTCAACGTGATGGTGATGTTTCTTCTAAAATAACCCTGTTATACAATTGTAATACAAGTATAATGAATATTTTTAGTACTACCTGCGGTAAAACTAAAGTTTCCTACAGTATTTTGGATCCTGCTTCGTTCTCACTCACATGTACTCCGGGTGTTATTGTTGAGTTTCCAATTTCGGTAACCCAAACTACACAAATTGCAACGGTTAATGGTATTAACCAAGCATTACAAGGCGGTTTTGATTTGAAATGGACGGGAAATTATGGAGAGTGTCAGAGGTGCGTTGATTCTGATGGTGTGTGTGGCAGCAACGACGGAGGAAATGAATTTAGATGTTTCTGCAAAGATGGATCTCATACAACTTCATGTACTTCACAAAAGGTCTTAACCTCAAACAATAGTACAAAACGGAACTGGAGTCTTACTGTGATAGGTGTTGTAGTTGCTGGATTTGGAGTAACAATGTTCTTTATTATTATGATCAGTTGTTACCTTAAGAGGGGTACAAGTAGACAGAATATGAGTATTTTAAGGAAAAGAAGAAAAGTTGTTCACCACAATGTAGAGGTTTTCATGCAAAGTTATAATTCATCTATGCCAAGAAGATATAGTTATACAGAACTAAAAAGGATAACAAACTCTTTCCGAGATAAATTAGGCCAAGGAGGATATGGTGTTGTGTACCACGCAAGTTTGATTGATGGTCGTGAAGTGGCGGTAAAAGTAATAAACGAGTCAAAAGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACATCACACATGAACATTGTGTCCCTTTTAGGCTTTTGTTATGAGGGAAATAAAAGAGCACTAATATATGAATTCATGCCCAAAGGATCATTGGACAAGTTTATCTATAAAAGCGAATTTCCTAATGCTATTTGTGATTTTGATTGGAACACTTTGTTCCAAATTACAATTGGCATTGCTAGAGGTTTAGATTACTTGCATCAAGGATGTAGTTCAAGGATTTTGCATCTTGATATAAAGCCTCAAAACATTCTTTTGGATGAAGATTTTTGCCCAAAAATCTCTGATTTTGGACTAGCGAAAATATGCCAAAGGAATGATAGTATTGTGTCAATATTAGGGACAAGAGGAACTATAGGATATATGGCACCAGAAGCGTTTAGTAGAGCATTTGGTGGAGTTTCTTACAAATCTGATGTATATAGTTATGGCATGTTGATTCTTGAAATGATCGGAGGAAGGAAGAACTACGACATTGGAGGATCTTGTACTTCTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAGCAAGGTAATACTCTTTCAAATTGTTTGATAGTCTCGGAGGAAGAAAATGATATAGTTAGAAAGATGACTTTGGTGAGTCTATGGTGCATTCAAACCAAACCATTAGACAGACCACCAATGAATAAAGTAATAGAAATGTTGCAAGGACCACTCTCATCAGTGTCATATCCTCCGAAGCCCGTCTTACATTCACCTGAAAGGCCACCACTGCAAGTGTCCGATATGTCTTCATCCGATTTGTATGAGATAGATTCAATTACAATATCAAAATAA 1998 0.3654 MLHHPSSSIIIFFFYFTLLIISIINIPTCMCDDDDDQYANCNNAFNCGSSIADIKYPFWGENREKYCGAVSSDPNMELTCEEKVPKITINNVKYRILDWDDTIQKLTVARDDYWSGICAVNVSDNPKNSIFSNTLFQRDGDVSSKITLLYNCNTSIMNIFSTTCGKTKVSYSILDPASFSLTCTPGVIVEFPISVTQTTQIATVNGINQALQGGFDLKWTGNYGECQRCVDSDGVCGSNDGGNEFRCFCKDGSHTTSCTSQKVLTSNNSTKRNWSLTVIGVVVAGFGVTMFFIIMISCYLKRGTSRQNMSILRKRRKVVHHNVEVFMQSYNSSMPRRYSYTELKRITNSFRDKLGQGGYGVVYHASLIDGREVAVKVINESKGNGEEFINEVASISRTSHMNIVSLLGFCYEGNKRALIYEFMPKGSLDKFIYKSEFPNAICDFDWNTLFQITIGIARGLDYLHQGCSSRILHLDIKPQNILLDEDFCPKISDFGLAKICQRNDSIVSILGTRGTIGYMAPEAFSRAFGGVSYKSDVYSYGMLILEMIGGRKNYDIGGSCTSEMYFPDWIYKDLEQGNTLSNCLIVSEEENDIVRKMTLVSLWCIQTKPLDRPPMNKVIEMLQGPLSSVSYPPKPVLHSPERPPLQVSDMSSSDLYEIDSITISK* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2985 665 Pfam Wall-associated receptor kinase galacturonan-binding 41 109 IPR025287 GO:0030247
Mal3g2985 665 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 662 IPR045874 GO:0004672
Mal3g2985 665 SMART serkin_6 348 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2985 665 Pfam Protein tyrosine and serine/threonine kinase 350 622 IPR001245 GO:0004672|GO:0006468
Mal3g2985 665 ProSiteProfiles Protein kinase domain profile. 348 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2985 665 SUPERFAMILY Protein kinase-like (PK-like) 324 622 IPR011009 -
Mal3g2985 665 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Mal3g2985 665 Pfam Wall-associated receptor kinase C-terminal 179 252 IPR032872 -
Mal3g2985 665 Gene3D Phosphorylase Kinase; domain 1 321 422 - -
Mal3g2985 665 Gene3D Transferase(Phosphotransferase) domain 1 423 630 - -
Mal3g2985 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Mal3g2985 665 PANTHER TYROSINE KINASE FAMILY PROTEIN 21 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2985 Mal-Chr3 104613033 104615406 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2985 19 654 Receptor kinase-like Gene Family AT5G38260 40.152 3.01e-154 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal3g2985 PK_Tyr_Ser-Thr 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2985 - - cam:101489912 920.228