Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2983 ATGGCTTCCATGTTAAATATCCTCCCTACTTTCCATATTCTTCAATTCATAATCCTCTTTACACTGATTCAGATACCTTTACATTTGAGCTCTAATGAAGGTTGTGAGAATCTGTTTAGTTGTGGAAATATAACACAAATTGGTTTTCCTTTCTGGGGAGGGGATAGACCAAAAGAGTGTGGACACCCTTTGATGAATCTCACTTGCATAAACAAATTCAGCTACATAACAATCAATGAACTCAAGTATATGGTTTTGGAGGCCAGCCCTAATTTACATGCTATGAGAATTACCAGAGAGGACTATTTACAAGAAGGACTATGTTCATCAAAACATGTCAACACAACATTAGACACTGAACTCTTTGTTTATGGTTTAAACTACAATCTTACACTCTTCTATGGTTGTCCACATTCAATTACTTTCCCTTCGCCTGGCGGACGCTTTCTATGTCCTTCAAATGGTTCTTCTGATGAATATGTTTATACTTGGTTTGGTTCTAATATTGGTTCTCAAGCTTTGTCATGCCAAGAAAGCAGGGTTGTTCCGATCACTCATTCGTTGATTGATGTTAGTGATTTCACTGAAACACAAAGGGCAATCAGAGATGGATTTGTGGTAAGGTGGATAGCTGGTATTGAAGATTGTGAGAAGTGTCAAAAATTAGGTGGATTTTGTGGCTATAACTGGACTTCAAAGCAAACAACCTGCTACTGCAGAGACCAATCTTGTTCTAATGAAGCTCCACAGTCTCAGCAATCTCCACCTCCAGGTTCAAAACGGAAGTGGAGACTTATTGTGATAGGTGCTTCGCTGGTTGGATTTGGAGTAACAATGCTCTTTATTATTTTGATTGGTTGCCACCTCAAAAGGGGTATAGGTAGACAACATAAGATCATTTTCTGGAAAAGAAAAAAACTTGTGGACCACGATGTGGAGATTTTCATGCAAAGGTATAATTTATCATTGCCAAGAAGGTATAGTTATACAGAAGTAAAAAGGATCACAAATTCATTTCAAGATAAATTAGGGGAAGGAGGATATGGTGTTGTATACAAAGCAAGTTTACCTGATGGTCGTCAAGTGGCCGTGAAAGTAATAAACGAGTCAAAAGGAAATGGGGAAGAGTTCATAAATGAAGTTGCTAGCATTAGTAGAACATCACACATGAATATTGTGTCACTTTTAGGCTTTTGTTATGAGATGAAGAAAAGAGCACTAATATATCAGTTCATGCCCCAAGGATCATTGGATAAGTTCATCTATAAAAGTGGATTTTCTGAAGCTGTTTGTGATTTTAATTGGAACACTTTGTTCCAAATTACAATTGGCATTGCTAGAGGACTAGAGTACTTGCATCAAGGATGTAGTTCAAAGATTCTGCATCTTGATATCAAACCTCAAAACATTCTTTTGGATGAAGACTTTTGTCCAAAAATTTCTGATTTTGGACTTGCTAAAATATGTCAAAGGAAGGATAGTACCGTGTCAATACTTGGCACAAGAGGAACTATAGGATATATGGCGCCAGAAGTATTTAGTAGAGCATTTGGTGCTGTTTCTAACAAATCTGATCTATATAGTTATGGCATGTTGATTCTTGAAATGATCGGAGGAAGGAAGAACTACGACACTGGAGGATCTTGTACTTCTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAGCAAGGTAGTAATGACCTTTTTGATTGTTTGACAGTCTCAGAGGAAGAAAATGATATGGTTAGAAAAATTACTTTGGTAAGTCTATGGTGCATTCAAACCAATCCATCACAAAGACCATCGATGAATAAAGTAATAGAAATGTTGCAAGGACCACTTTCATCAGTGTCATATCCTCCAAAGCCCATCTTATTTTCTCATGAAAGGCCACTACTACAAGTGTCACATGTATCTTCATCTGATTGGTATGAGACAAATTCAATTACTGTATCAAATTAA 1968 0.3684 MASMLNILPTFHILQFIILFTLIQIPLHLSSNEGCENLFSCGNITQIGFPFWGGDRPKECGHPLMNLTCINKFSYITINELKYMVLEASPNLHAMRITREDYLQEGLCSSKHVNTTLDTELFVYGLNYNLTLFYGCPHSITFPSPGGRFLCPSNGSSDEYVYTWFGSNIGSQALSCQESRVVPITHSLIDVSDFTETQRAIRDGFVVRWIAGIEDCEKCQKLGGFCGYNWTSKQTTCYCRDQSCSNEAPQSQQSPPPGSKRKWRLIVIGASLVGFGVTMLFIILIGCHLKRGIGRQHKIIFWKRKKLVDHDVEIFMQRYNLSLPRRYSYTEVKRITNSFQDKLGEGGYGVVYKASLPDGRQVAVKVINESKGNGEEFINEVASISRTSHMNIVSLLGFCYEMKKRALIYQFMPQGSLDKFIYKSGFSEAVCDFNWNTLFQITIGIARGLEYLHQGCSSKILHLDIKPQNILLDEDFCPKISDFGLAKICQRKDSTVSILGTRGTIGYMAPEVFSRAFGAVSNKSDLYSYGMLILEMIGGRKNYDTGGSCTSEMYFPDWIYKDLEQGSNDLFDCLTVSEEENDMVRKITLVSLWCIQTNPSQRPSMNKVIEMLQGPLSSVSYPPKPILFSHERPLLQVSHVSSSDWYETNSITVSN* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2983 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Mal3g2983 655 PANTHER RUST RESISTANCE KINASE LR10-RELATED 34 652 IPR045874 GO:0004672
Mal3g2983 655 Pfam Wall-associated receptor kinase C-terminal 170 242 IPR032872 -
Mal3g2983 655 ProSiteProfiles Protein kinase domain profile. 337 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2983 655 Gene3D Phosphorylase Kinase; domain 1 311 411 - -
Mal3g2983 655 SUPERFAMILY Protein kinase-like (PK-like) 316 612 IPR011009 -
Mal3g2983 655 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Mal3g2983 655 PANTHER TYROSINE KINASE FAMILY PROTEIN 34 652 - -
Mal3g2983 655 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Mal3g2983 655 SMART serkin_6 337 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2983 655 Gene3D Transferase(Phosphotransferase) domain 1 412 620 - -
Mal3g2983 655 Pfam Protein kinase domain 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2983 Mal-Chr3 104594792 104607434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2983 14 651 Receptor kinase-like Gene Family AT5G38260 39.084 8.67e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal3g2983 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2983 - - cam:101489912 735.717