Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2978 ATGGCAGATGTTGATTACCATGAAAATTCCATTGCTACCCCTACCTCCACCAATACCCTAAAGCTCTTTGGCATCAACATTCAAGAAGCTTGTTTGAACCAATCTCCATCACAATCAGAATCATCTGAGCCTTTGAATGGGAGAAAATTATACGAGTGTCAATATTGTTGTAGAGAATTTGCGAATTCACAAGCGTTAGGAGGACATCAGAACGCACACAAGAAAGAAAGACAACTTTTGAAACGTGCTCAAATGCAAGCAGCTCGTGCACTTGTTCCTTCACATTTCCATAACACATTCATGTCGCTGCCGCCACAACATCATTTCAGCGCCGGTGCTCTACCGTCTCAACCACCTACGTCGGCGTGGCTATACACAACTCATGATGCAGGTTCAAGAGCTTTTTTAGCTCCCGCTGCTGCGTTTGATGGCAATGCTCATCACCATAGTTCTAAGTCTGGTGGATTCAATAGTGGTGATAATTGTAGTGGGCAAGGGTTTGGTTTAAATTTGCATCTTGGACTATAA 528 0.4337 MADVDYHENSIATPTSTNTLKLFGINIQEACLNQSPSQSESSEPLNGRKLYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARALVPSHFHNTFMSLPPQHHFSAGALPSQPPTSAWLYTTHDAGSRAFLAPAAAFDGNAHHHSSKSGGFNSGDNCSGQGFGLNLHLGL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2978 175 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Mal3g2978 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Mal3g2978 175 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 175 - -
Mal3g2978 175 PANTHER ZINC FINGER PROTEIN 5 1 175 IPR044299 GO:0010090
Mal3g2978 175 SUPERFAMILY beta-beta-alpha zinc fingers 47 78 IPR036236 -
Mal3g2978 175 Gene3D Classic Zinc Finger 32 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2978 Mal-Chr3 104549812 104550339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2978 15 135 C2H2 Transcription Factor Family AT1G67030 49.306 2.45e-28 102