Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2969 ATGGCTTTCACCAACCAAGACTCAGATTTTGCATATTTGGAACATATTCAACAATACCTTCTTTTTGATGATTCTAGCATGCTTGAATCTCATCAACCTTTTCCAAGCCCTAAAAGTGACAATGATTCAAACACAACTGTTGAAGCGCGTGAAGTAAGCACGCCTCCCATATGGAAGCGGTACAAGGGTGTGAGGCGTAGGCCATGGGGGAAGTTCGCGGCAGAGATTAGAGATCCAAAAAAGAATGGCGCTAGAGTTTGGCTTGGAACTTATCTGACTGAGGAGGAAGCAGGTTTGGCTTACGACAAAGCTGCTTTTAAGATGCGAGGCCGAAAGGCCAAGCTTAATTTTCCCCACCTCATTGGCTCTGATGTGTCGTTGGAGCCAAAGAGGGAGGTGGTTTTGAAACGGGAATCGCCTGAGCCTTCTTCTTCTTCATCAGAGGGAAGTTTCGAGTCATTGTCACCAGGGTCGAAGAGGAGGAGGGGCATGGTTGACCTACTTAACAAATTAGCCAAGAAAAGAAGCCAAGCAACCATGGTGGTTGAAATTGAAAAGACCTCACAAGCAAATGATTTTGAGCAGTGGGTGAATGAGTTGAATGATTGCACTCTAAACTGGAGCTCATAG 630 0.4556 MAFTNQDSDFAYLEHIQQYLLFDDSSMLESHQPFPSPKSDNDSNTTVEAREVSTPPIWKRYKGVRRRPWGKFAAEIRDPKKNGARVWLGTYLTEEEAGLAYDKAAFKMRGRKAKLNFPHLIGSDVSLEPKREVVLKRESPEPSSSSSEGSFESLSPGSKRRRGMVDLLNKLAKKRSQATMVVEIEKTSQANDFEQWVNELNDCTLNWSS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2969 209 MobiDBLite consensus disorder prediction 132 159 - -
Mal3g2969 209 Pfam AP2 domain 60 110 IPR001471 GO:0003700|GO:0006355
Mal3g2969 209 CDD AP2 59 120 IPR001471 GO:0003700|GO:0006355
Mal3g2969 209 MobiDBLite consensus disorder prediction 31 51 - -
Mal3g2969 209 PANTHER DNA-BINDING DOMAIN 1 178 IPR044808 GO:0003700|GO:0009873
Mal3g2969 209 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
Mal3g2969 209 PRINTS Ethylene responsive element binding protein signature 100 120 IPR001471 GO:0003700|GO:0006355
Mal3g2969 209 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mal3g2969 209 Gene3D AP2/ERF domain 59 119 IPR036955 GO:0003700|GO:0006355
Mal3g2969 209 MobiDBLite consensus disorder prediction 139 154 - -
Mal3g2969 209 ProSiteProfiles AP2/ERF domain profile. 60 118 IPR001471 GO:0003700|GO:0006355
Mal3g2969 209 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 1 178 - -
Mal3g2969 209 SMART rav1_2 60 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2969 Mal-Chr3 104425553 104426182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2969 60 145 AP2-EREBP Transcription Factor Family AT2G44840 73.256 2.37e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g2969 AP2 1.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2969 K09286 - gmx:102663872 243.817