Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2960 ATGGAAAGGGTTGCAGAGCCAAAGGTACTTCCTCGGACCTTGCCTGTTGTGTTTGAGGTATCTGATGCTCACACATCTGTAATAAGAGAAGCTGCTCAGAGACTAACCCGGCAAGATGTTTCATGTGCGCGCGAGGTTTCAGCAAGAGAAGTCAATCAGTTTCCGAAAGTACAGGATGGCCCTATGACCCGTCTGGCCTCCATTAGAGAAGTGGCTCAGTTATCAAATGCAAGAATTGTTTTGGTAAGAGAAGATATGGAATTCGATACACGATCCTCTCAAGAACCTGTCTCACTGAAAGGAAAAGCGTCTTTACCAGAACCCGAAGAACTCGTGCCTGATATCGAGACATTGAAGATCAGCAGTGATTCTTTTGGGGAAACTGACCCAAGTTTGTTTGCTGGTGCTAGTCACCCCCCAGAACCTGTTGATACTGATCTCATGAGAACGGTTTATGTACCAATAGGTCAGAACAAATCCGAGGCTGGATGCTTAATGAAGAGCATGTCCTTGAAGGGTCCTTTCCTAGAAGATCTTTCGATTCGTAATCTCACTAAGAAACCAAGCCTAGCTGTTGTTTCTCCTGCAGAAAGTACGGTTGAAGAATCGAATGACATGCAGAACTTAGCCTCACCGTTTTCAGGTGCTCATGCACCGCAGAATACCAAGAACTGCCTTCCTCCCCCGGATTCTGAGGAGAATGAATGTGTTTGGGATTCTTCTTTGCCTCCAAGTGGAAATGTCAGTCCACACAGTAGCATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGCTAATAGTTGTGCGAGTACATATCGCAGCGATGCATTCACTAGTGATGGCATGCTTAGTATAGACAGGAATTGTGATAGTATTAAAGGAAATGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGCCGAGCAAGTGATAGCAGTGGCCTCAGTGATGATAGCAACTGGAGTAACATCACTGGTAGTGCCAATAAACCACATAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCGTTCGAGCACGGGATGGAATTTTGGGCATGAGTCATTTTAAGTTACTCAGACGACTTGGTTGTGGTGATATCGGAAGTGTGTATCTCTCTGAGCTGAGTGCAACTAGGTGTTATTTTGCAATGAAAGTTATGGACAAGGCATCCCTAGCTTCCAGAAAGAAGCTGATTAGGGCACAGACAGAAAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCTACGTTGTATACACATTTTGAGACCGACAGATTTTCATGTCTGGTAATGGAATACTGTCCGGGCGGTGATCTGCACGCTTTAAGGCAACGGCAACCAGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCAATTGAATATCTTCACATGCTCGGAGTTGTTTATCGAGACCTTAAACCCGAAAACGTACTAGTCCGAGAAGACGGTCACATAATGCTCTCAGATTTCGACCTTTCTCTTAGGTGCGTTGTTTCACCTACCCTTATCCGAACTCATGACGGCGACCCTTCAAAACGGGCAGGTGCATTCTGTGTCCAGCCTGCTTGTATCGAGCCTACGTCGGTATGCATCCAGCCTGCCTGTTTTATGCCGAAGCTTTTTTCTCAGAAAAATAAGAAGTCACGGAAGCCTAAATCCGATCCTGGCCTATCAACTGGTTCACTTCCGGAACTTCTTGCCGAGCCTACAACAGCTCGGTCGATGTCCTTCGTTGGTACGCATGAATATCTAGCCCCTGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCACGAGTTATTATATGGTAAAACACCTTTCAAAGGATCAGGAAACCGAGCTACACTGTTTAATGTAGTTGGGCAGCAGCTCAAGTTTCCTGAGTCGCCAGCTACGAGTTATGCAAGCCGTGATCTGATCCGAGGTTTGCTCGCAAAGGAGCCGCAGAATCGTCTTGGAGTGAAGAGGGGTGCAACTGAACTCAAACAGCACCCTTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCGGAAATTCCAAGGCCGATGGAAAGTGAACTACCGGCTAAGTTTGAAGCTGTTGAAAACACTGTTGGGCTTGGGAGCGATAGTAAGAAGATGGTTGGTGGTAATAATGAGATGAAATCTGGGGGTGGTAAATATCTTGACTTTGAGTTCTTTTAG 2268 0.4586 MERVAEPKVLPRTLPVVFEVSDAHTSVIREAAQRLTRQDVSCAREVSAREVNQFPKVQDGPMTRLASIREVAQLSNARIVLVREDMEFDTRSSQEPVSLKGKASLPEPEELVPDIETLKISSDSFGETDPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLMKSMSLKGPFLEDLSIRNLTKKPSLAVVSPAESTVEESNDMQNLASPFSGAHAPQNTKNCLPPPDSEENECVWDSSLPPSGNVSPHSSIDSTSVVRTMSIANSCASTYRSDAFTSDGMLSIDRNCDSIKGNVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAVRARDGILGMSHFKLLRRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLIRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHALRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDGDPSKRAGAFCVQPACIEPTSVCIQPACFMPKLFSQKNKKSRKPKSDPGLSTGSLPELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLAKEPQNRLGVKRGATELKQHPFFEGVNWALIRCSTPPEIPRPMESELPAKFEAVENTVGLGSDSKKMVGGNNEMKSGGGKYLDFEFF* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2960 755 ProSiteProfiles Protein kinase domain profile. 360 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2960 755 MobiDBLite consensus disorder prediction 211 228 - -
Mal3g2960 755 MobiDBLite consensus disorder prediction 297 337 - -
Mal3g2960 755 MobiDBLite consensus disorder prediction 238 256 - -
Mal3g2960 755 SMART serkin_6 360 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2960 755 MobiDBLite consensus disorder prediction 559 579 - -
Mal3g2960 755 Gene3D Transferase(Phosphotransferase) domain 1 586 709 - -
Mal3g2960 755 SUPERFAMILY Protein kinase-like (PK-like) 342 713 IPR011009 -
Mal3g2960 755 MobiDBLite consensus disorder prediction 301 333 - -
Mal3g2960 755 MobiDBLite consensus disorder prediction 211 256 - -
Mal3g2960 755 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 80 755 - -
Mal3g2960 755 CDD STKc_phototropin_like 358 710 - -
Mal3g2960 755 PANTHER FLIPPASE KINASE 1-RELATED 80 755 - -
Mal3g2960 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Mal3g2960 755 Gene3D Transferase(Phosphotransferase) domain 1 444 512 - -
Mal3g2960 755 Gene3D Phosphorylase Kinase; domain 1 358 443 - -
Mal3g2960 755 Pfam Protein kinase domain 588 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2960 755 Pfam Protein kinase domain 361 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2960 Mal-Chr3 104308301 104312087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2960 1 755 AGC Kinase Gene Family AT2G44830 65.201 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal3g2960 Pkinase 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2960 - - gmx:100818352 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0100 5 2088386 2091408 Mal3g2960 3 104308301 104312087 PCT